Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0872 ATGAAAAAGTTGTATGGAGGAGTTCTGGTTGCTTCACTGTTTATGTTGTTTATGCTTATGATCCTGCGAAATGGGATCATGAAAACTTCTATTGGTCAAGGTTATTTGACTATTCCTATCCTGGTTAATGGAACTAATCCTCTAGCATGGATAAATCCCACACTACCAGCTGCTATTCAAAATCCAGATGATCATTCTCAAGTTATTTCTTCTGATATTTTAGTATCTAGCCTCTTTGCTGGGAGCAACTTTTCCAAAGACGAGCAACAAGCTCTGCAGACATGGAACCAATTGAACCACTTAATTGATCACACTCAGGGTTTACCCAGTGCAGCAGAAGCCATAAAGGAGGCTGCCAGTGCATGGAACTCTCTTATTTCCTCAATTGAAGAGCAAAAACAAGGTCGTGCAAATGATAGTTCAAGAACTAAAGAGAAGCAATGTCCCCACTTTCTTAATAAAATGAATTCCACTGAACTTGGTAACAGTAGTTACAAAATGCAAGTACCTTGTGGCTTGACACAAGGTTCTTCCATCACTGTAATTGGCATTCCGAACGGCTTTTTAGGTAATTTTCGGATTGACTTGACTGGAGAACCACTTCCTGGGGAACCCGATCCACCAATTATTTTACACTATAATGTTCGCCTGCATGGGGATAAAATCACTGAAGATCCAGTAATTGTCCAAAACACCTGGACTATAGCTCATGATTGGGGTGAGGAGGATCGTTGTCCATCCCCTACTCCTAAAAAGGTCGAAAAAGTTGATGAATTGGAGCAGTGTAATAAGATTGTAGGGAAGAACATTAGCCAACTTCACACAGCTGGGATGCATTCCCACACTTCAAGAGAATCTTTAACAACGGAAGAACAATCGATGAATAGGAAATACTTTCCTTTTAAGCAGGGTTACCCATTTGTTGCAACTTTAAGGGTGGGATCTGAGGGAATCCAGATGACAGTTGATGGAAAGCACGTAACTTCATTTGCTTTTCGTGAAACGTTGGAGCCATGGCTTGTCAGTGAAATAAAAATCTCAGGGGACATCAAATTAATATCTATTCTTGCTAGTGGTCTGCCCACATCAGAGGATTCAGAGCATATAATTGACCTAGAATCATTGAAATCAAGTCCTATATCTGCACAGACCCCATTGGATCTCTTCATTGGTGTTTTCTCTACTGCTAACAATTTTAAACGTCGAATGGCTGTTAGAAGAACCTGGATGCAGTACAATGCTGTTCGATCAAATATGACAGCTGTGCGCTTCTTTGTTGGTTTGCATAAAAGCCCAATAGTTAATGAAGAGCTGTGGAGGGAAGCACAAACTTATGGAGACGTGCAGCTGATGCCATTTGTTGACTACTACAGCCTCATCACGTGGAAAACTTTGGCAATCTGCCTTTTTGGGACACAAGTTTCGGCAAAGTTTGTCATGAAGACGGATGATGATGCGTTTGTCAGGGTAGATGAAGTTCTAGGCTCTTTGCACAGGATCAATGTTGATCATGGGTTACTGTATGGACTCATCAATTCGGATTCCAGACCTCATCGAAATACAGATAGCAAATGGTACATCAGCCCAGAGGAATGGAGCGAAGGAACTTATCCTCCTTGGGCACATGGTCCCGGCTATGTGGTCTCACACGATATAGCAAGAACGGTTGCCAAGAAATTCAGAGAGAACCATTTGAAGATGTTTAAATTAGAAGACGTTGCAATGGGAATTTGGATTGCAGACATGAAGAAGGAAGGTGTAGATGTTCGGTGTGAGAATGAGGACAGAGTGTATCCTGAGGGTTGTAAGGATGGTTATGTGGTTGCCCATTACCAGGGCCCTAGGGAGATGCTCTGTTTGTGGCAGAAACTTGAAGAAGGAAAAGGTGCAAAATGCTGTGGTGATAGGAAATGA 1914 0.4195 MKKLYGGVLVASLFMLFMLMILRNGIMKTSIGQGYLTIPILVNGTNPLAWINPTLPAAIQNPDDHSQVISSDILVSSLFAGSNFSKDEQQALQTWNQLNHLIDHTQGLPSAAEAIKEAASAWNSLISSIEEQKQGRANDSSRTKEKQCPHFLNKMNSTELGNSSYKMQVPCGLTQGSSITVIGIPNGFLGNFRIDLTGEPLPGEPDPPIILHYNVRLHGDKITEDPVIVQNTWTIAHDWGEEDRCPSPTPKKVEKVDELEQCNKIVGKNISQLHTAGMHSHTSRESLTTEEQSMNRKYFPFKQGYPFVATLRVGSEGIQMTVDGKHVTSFAFRETLEPWLVSEIKISGDIKLISILASGLPTSEDSEHIIDLESLKSSPISAQTPLDLFIGVFSTANNFKRRMAVRRTWMQYNAVRSNMTAVRFFVGLHKSPIVNEELWREAQTYGDVQLMPFVDYYSLITWKTLAICLFGTQVSAKFVMKTDDDAFVRVDEVLGSLHRINVDHGLLYGLINSDSRPHRNTDSKWYISPEEWSEGTYPPWAHGPGYVVSHDIARTVAKKFRENHLKMFKLEDVAMGIWIADMKKEGVDVRCENEDRVYPEGCKDGYVVAHYQGPREMLCLWQKLEEGKGAKCCGDRK* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0872 637 SMART Gal_bind_lectin_2 169 357 IPR001079 GO:0030246
Pvu2g0872 637 Gene3D - 156 356 - -
Pvu2g0872 637 PANTHER - 65 626 - -
Pvu2g0872 637 Pfam Galactoside-binding lectin 165 356 IPR001079 GO:0030246
Pvu2g0872 637 Pfam Galactosyltransferase 400 583 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pvu2g0872 637 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 165 358 IPR001079 GO:0030246
Pvu2g0872 637 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 65 626 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pvu2g0872 637 CDD GLECT 165 355 IPR001079 GO:0030246
Pvu2g0872 637 SUPERFAMILY Concanavalin A-like lectins/glucanases 165 358 IPR013320 -
Pvu2g0872 637 Gene3D - 378 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0872 Pvu-Chr2 13180142 13185778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0872 1 633 Glycosyltransferase AT1G26810 62.461 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0872 K14413 - gmx:100780913 1186.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0872 2 13180142 13185778 Pvu2g0872 2 13180142 13185778 ECH
Pvu3g1233 3 29620631 29628465 Pvu2g0872 2 13180142 13185778 PCT