Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1131 ATGGGAATCACAACCTACACACAGGAATACTCCTCCTCTGTTGCCCCATCACGCATGTTCAAGGCCTTGATCGTAGACTCAAAGAATTTGCTTCCCAAGCTCTTACCTCAGTTTGTAAAAGATGTGAACGTAATCCAAGGTGATGGGGAAGCTGGAAGCATTGAACAAGTAAACTTCAATGAAGCTAGCCCCTTCAAATATCTGAAACACAGGATTGATGTGCTTGATAAGGAGAACTTGGTTTGCAAGTACACTATGATTGAAGGGGATCCTTTAGGGGACAGACTTGAGTCTATAAGTTATGAGGTAAAGTTTGAGGCCACTAGTGATGGAGCTTGCCTCTGCAAAATGACAAGCAATTACAATACCATTGGGGAGTTTGATGTTAAAGAGGAAGAAGTAAAGGAAGGAAGGGAAAGCACTATTGCAATTTACAAAGTTGTGGAGTCATACCTGTTGGAGAATCCACAAGTATATGCTTAA 483 0.4161 MGITTYTQEYSSSVAPSRMFKALIVDSKNLLPKLLPQFVKDVNVIQGDGEAGSIEQVNFNEASPFKYLKHRIDVLDKENLVCKYTMIEGDPLGDRLESISYEVKFEATSDGACLCKMTSNYNTIGEFDVKEEEVKEGRESTIAIYKVVESYLLENPQVYA* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1131 160 CDD Bet_v1-like 5 152 - -
Pvu3g1131 160 Gene3D - 1 160 IPR023393 -
Pvu3g1131 160 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu3g1131 160 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu3g1131 160 PRINTS Major pollen allergen Bet V1 signature 50 59 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu3g1131 160 PRINTS Major pollen allergen Bet V1 signature 66 85 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu3g1131 160 PRINTS Major pollen allergen Bet V1 signature 85 98 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu3g1131 160 PRINTS Major pollen allergen Bet V1 signature 110 126 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu3g1131 160 PRINTS Major pollen allergen Bet V1 signature 144 154 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu3g1131 160 PANTHER PATHOGENESIS-RELATED PROTEIN BET V I FAMILY PROTEIN 1 160 - -
Pvu3g1131 160 Pfam Pathogenesis-related protein Bet v 1 family 1 154 IPR000916 GO:0006952
Pvu3g1131 160 PANTHER - 1 160 - -
Pvu3g1131 160 SUPERFAMILY Bet v1-like 3 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1131 Pvu-Chr3 26991324 26992353 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1131 - - gmx:100527307 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1131 3 26991324 26992353 Pvu3g1131 3 26991324 26992353 ECH
Pvu3g1131 3 26991324 26992353 Pvu9g2608 9 36547187 36548248 PCT
Pvu9g2607 9 36542081 36543117 Pvu3g1131 3 26991324 26992353 PCT