Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0912 ATGGGGGTTGGTTCCCAGGATGCTATCAAGCAGTTCCAGGCATTCATTGACCAAGTCGAGGAGCCTTTGCGAAGAACGTTTCAGAATGTTCATCAAGGATATGTCACCGAAACTTTAATGCGGTTCCTAAAAGCAAGGGACTGGGATCCTTCCAAGGCCTATAAAATGTTGGTTGACTGTTTAAATTGGAGAGTGCAAAATGAGATTGACCATATATTATCTAAACCAATTGTTCCCGCTGATTTATATACAGCAGTGCGTGATTCACAGCTCATAGGATTGTCTGGTTACTCCAAAGAGGGTCTGCCTGTCTTTGCAATCGGTGTTGGGCTTAGCACATTTGACAAAGCATCTGTCCATTATTACGTGCAGTCACACATTCAAATTAATGAATATCGTGACCGTATAATCTTGCCTTCTGCATCAAAGAAGCATAAGCGGACTATTACCACATGTATAAAGGTTTTAGACATGACCGGTCTGAAGTTATCAGCCCTGAATCAGATTAAGTTGTTAACTATTATATCATCCATTGATGATCTGAATTACCCCGAGAAGACAAATACTTATTACATTGCAAATGCTCCATACATATTTTCAGCTTGTTGGAAGGTTGTGAAGCCACTTTTACAAGAGAGAACAAGAAGAAAAATACAGGTTTTACCCGGTTGTGGTCGAGATGAGCTGTTGAATGTCATGGATTACTCGTCGCTACCACATTTCTGTAAAAGAGAAGGCTCCGGATCATCCAAACATTCAGAAACGGGAAGTGAAAATTGTTATTCCTTGGATCACCCCTTCCATCAAGAGCTCTATAACCACATCAAGCAGCAAGCCAGGCAACGTGAAACTGTTGAACCCATCAAACACGGCTCGTTTCACGTGGATTTTCCCGAACCTCCTGATGATGAATCTGAGATCGCCAAGACTATAGAGTCAGAGTTACACAAGTTTGAGAACGGCAATGGTGTCTAA 975 0.4174 MGVGSQDAIKQFQAFIDQVEEPLRRTFQNVHQGYVTETLMRFLKARDWDPSKAYKMLVDCLNWRVQNEIDHILSKPIVPADLYTAVRDSQLIGLSGYSKEGLPVFAIGVGLSTFDKASVHYYVQSHIQINEYRDRIILPSASKKHKRTITTCIKVLDMTGLKLSALNQIKLLTIISSIDDLNYPEKTNTYYIANAPYIFSACWKVVKPLLQERTRRKIQVLPGCGRDELLNVMDYSSLPHFCKREGSGSSKHSETGSENCYSLDHPFHQELYNHIKQQARQRETVEPIKHGSFHVDFPEPPDDESEIAKTIESELHKFENGNGV* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0912 324 Gene3D - 4 292 IPR036865 -
Pvu3g0912 324 Pfam CRAL/TRIO domain 90 241 IPR001251 -
Pvu3g0912 324 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 82 239 IPR001251 -
Pvu3g0912 324 PANTHER OS09G0258000 PROTEIN 1 324 - -
Pvu3g0912 324 SMART CRAL_TRIO_N_2 35 60 IPR011074 -
Pvu3g0912 324 Pfam CRAL/TRIO, N-terminal domain 24 59 IPR011074 -
Pvu3g0912 324 SUPERFAMILY CRAL/TRIO domain 83 278 IPR036865 -
Pvu3g0912 324 CDD SEC14 83 241 IPR001251 -
Pvu3g0912 324 PANTHER - 1 324 - -
Pvu3g0912 324 SUPERFAMILY CRAL/TRIO N-terminal domain 13 76 IPR036273 -
Pvu3g0912 324 SMART sec14_4 79 247 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0912 Pvu-Chr3 15567459 15571772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0912 1 324 Acyl Lipid Metabolism Gene Families AT5G47730 71.605 1.29e-178 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0912 - - gmx:547507 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0912 3 15567459 15571772 Pvu6g1425 6 25118714 25122866 PCT