Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0902 ATGACTGCAGAAGATCAAGTGCCAAAGATTGAACTGCTAACATGGACCGATGATGAGTATGGTGGTGTTATTGTGGAAATGGACAAGCCTATGGATTCTGCAACCTTGTTGTCCACCCTCAGAGCTTCAATTTCACACTGGAAACAGTTGGGCAAGAAGGGTGTTTGGATAAAATTGCCTATTTATCTGGTCAGTCTAGTTGAAGCTCTAGTTAAGGAAGGATTTTGGTATCACCATGCAGAACCAAAATATTTAATGCTTGTATATTGGATTCCTGACTCTGCAGATACTATTCCAGCAAATGCCACACACCGCGTGGGTGTGGGATCATTTGTCGTAAATGAAAAACAAGAGGTCCTAGTGGTTCAAGAAAAGAGTGGACATTTTCAAGGAAGTGGAGCCTGGAAATTTCCTACTGGCGTTGTTGATCAGGGAGAAGATATTTGTGCAGCAGCAGTGAGGGAGGTCAAAGAAGAAACAGGAGTTGATGCTGAATTTCTGGAAGTAATGGCATTCAGACAAAGTCACATGTCATTCTTTGAGAAGTCAGATCTATTCTTTGTGTGCTTGCTGCGCCCTCTTTCTTCTGACATTCAAGTACAGGAGGTAGAGATAGAGGCTGCAAAGTGGATGCCATTTGATGAGTACGCAGCCCAGCCAATTATGGAAAAGTATGAGCTTATGAAGTACATCAATGATATCTACTCAGCAAAGATTGATGGGCAATATTCTGGATTTACTCCTGTATCTACTGCGTCAAACTTCTCTAAGAAAAATATCTATCTTTACTTGAATGCTGGTGGCCTGAAGAAGAGAAATTCTTTTGAAACAAGATGCATAATGTTAATGCACCCTTCGATATGGTTTGGCAAAGGAAAAAGAAAAGAGTATCCGAAACATACTGAACTACACATGGACCGTATACTGAAGAATTTGAAAATATCTTCTCTCCTTCACTTTCATTCTGGAGCCATTCAAAAAAGGCCTGTAAATACTAAACTTCAGACAACACGAAACTACCAGATTATAGATGTCTTTCCATTGGAGAGCTTTTAA 1056 0.4025 MTAEDQVPKIELLTWTDDEYGGVIVEMDKPMDSATLLSTLRASISHWKQLGKKGVWIKLPIYLVSLVEALVKEGFWYHHAEPKYLMLVYWIPDSADTIPANATHRVGVGSFVVNEKQEVLVVQEKSGHFQGSGAWKFPTGVVDQGEDICAAAVREVKEETGVDAEFLEVMAFRQSHMSFFEKSDLFFVCLLRPLSSDIQVQEVEIEAAKWMPFDEYAAQPIMEKYELMKYINDIYSAKIDGQYSGFTPVSTASNFSKKNIYLYLNAGGLKKRNSFETRCIMLMHPSIWFGKGKRKEYPKHTELHMDRILKNLKISSLLHFHSGAIQKRPVNTKLQTTRNYQIIDVFPLESF* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0902 351 Gene3D - 10 95 - -
Pvu3g0902 351 ProSitePatterns Nudix box signature. 140 161 IPR020084 GO:0016787
Pvu3g0902 351 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 63 81 IPR003293 -
Pvu3g0902 351 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 85 101 IPR003293 -
Pvu3g0902 351 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 101 119 IPR003293 -
Pvu3g0902 351 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 189 213 IPR003293 -
Pvu3g0902 351 SUPERFAMILY Nudix 71 226 IPR015797 -
Pvu3g0902 351 Pfam NUDIX domain 104 219 IPR000086 -
Pvu3g0902 351 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 105 237 - -
Pvu3g0902 351 Pfam Nudix hydrolase domain 13 91 IPR040618 -
Pvu3g0902 351 CDD Nudix_Hydrolase_12 104 235 - -
Pvu3g0902 351 PANTHER NUDIX HYDROLASE 2 3 272 - -
Pvu3g0902 351 ProSiteProfiles Nudix hydrolase domain profile. 103 233 IPR000086 -
Pvu3g0902 351 PANTHER NUDIX HYDROLASE RELATED 3 272 IPR003293 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0902 Pvu-Chr3 14989541 14994137 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0902 - - gmx:100778567 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0902 3 14989541 14994137 Pvu6g1452 6 25447399 25452012 PCT