Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0841 ATGGGGAAAAACATGAATGTGATCTCGTGGTGCTTGTTTGTGACGACCCTGTTGCTTTCTGCTGTGTCTTGTGCACCCAATGATGGGCTGCGTAGGATTGGGCTCAAGAAGATTAAATTGGACCCTAACAACAGGCTTGCTGCTCGAATTGGCTCCAAGGATGATTCTTTCCGTGCTTCTATTAGAAAGTTTCATCTCCAAAACAACTTTGGTGGGACTGAGGACACCGATATTGTTGCCTTAAAGAATTACCTAGATGCTCAGTATTTTGGTGAAATAGCCATTGGAACATCTCCTCAGAAGTTCACTGTCATTTTCGACACAGGCAGCTCTAATTTGTGGGTACCATCATCCCGATGCACCTTTTCGGTTGCATGCTACTTCCATGCTAAGTATAGGTCTAGCAAATCAAGTACTTACAAGAAAAATG 430 0.4349 MGKNMNVISWCLFVTTLLLSAVSCAPNDGLRRIGLKKIKLDPNNRLAARIGSKDDSFRASIRKFHLQNNFGGTEDTDIVALKNYLDAQYFGEIAIGTSPQKFTVIFDTGSSNLWVPSSRCTFSVACYFHAKYRSSKSSTYKKN 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0841 143 Pfam Eukaryotic aspartyl protease 88 143 IPR033121 -
Pvu3g0841 143 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 104 115 IPR001969 GO:0004190|GO:0006508
Pvu3g0841 143 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 10 143 IPR001461 GO:0004190|GO:0006508
Pvu3g0841 143 ProSiteProfiles Peptidase family A1 domain profile. 89 143 IPR033121 -
Pvu3g0841 143 Gene3D Acid Proteases 31 143 IPR021109 -
Pvu3g0841 143 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Pvu3g0841 143 PANTHER ASPARTIC PROTEINASE-LIKE 10 143 - -
Pvu3g0841 143 SUPERFAMILY Acid proteases 11 143 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0841 Pvu-Chr3 13024178 13025564 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0841 K08245 - gmx:100779619 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0841 3 13024178 13025564 Pvu6g1539 6 26105551 26110829 PCT