Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu3g0735 | ATGGAGTATTTCAACAAAGCCAAGGCCGTGAAGCTACGGAGCCACCTCGGGAAGTACCTAGTGGCCGACGACGACCACCACAAACTGCGTCAGAGCAAAAACGGCTCAACCAGAAATTCAATATGGTTGGTGGAGCTGGTGAAAGGGAAGAGCCACCACGTGCGTCTCAGAAACTCCAACGGCCGTTACCTAACCGCGACGGAGGCGCCCTTTCTGTTAGGCGTGACGGGGAATAAGGTGGTGCAGGGGAGTTTGGGGGATGGTTGGAATGGGAAATTGGAGTGGGAACCCATAACGGAAGGGTTGCACGTGAAACTGAGAAGCTGGTGCGGGAAGTACCTTAGAGGGAATGGTGGAACGTTACCGTGGAGAAACTCGATCACGCACGATGACCCTTACGCTTCCACCACCCACGATTGGATCTTGTGGGCTGTGGAGCCTCTGGAGTTTCCCGACAAACTGCTTTCTTCGCCGGAGACTCATTTTCCGTCGTCGTTGGAGTCGGAGGATGAGCTTCGCGGTTCGGAAGAACCGGGTTCGTCACTGTTGCAGAGCACAAGTTCCGACACCATGTTCCGCTCCGGCATGGAGCTCTTCCACCGCGCGAAGGTGGTGCGGCTGCGCAGCCACCACGACAAGTACCTCCTGGCGGACGAGGACGAGGAATCGGTGACCCAGGACCGAAACGGATCCTCCAGGAACGCCAAGTGGACAGTGGAGCTCATTCCGGAGTTCGACAACCTCTTACGGCTCAAGAGCTGTTACGGCAAGTATTTGACGGCCTCGAACCAGCCGTTGCTACTGGGCGTGACGGGGCGCAAGGTGGTGCAGAGCGTGCCGCGGCAGCTGGATTCCTCCGTGGAGTGGGAGCCCGTGCGGGACGGCGCGCAGGTGAAGCTGAAGACCCGTTACGGGAACTTTCTGAGGGCCAATGGGGGGCTCCCTCCTTGGAGGAACTCCGTGACGCACGATATCCCGCATAGGACCGCCACACAGGATTGGATCTTGTGGGATGTTGATGTGTTGGAGATCCACGTCGAGTCTCCTGCTCCTCCTCCTATTCCTCACTCTGATTCCCTCGATTTCGATTCCTATACTCCCTCTGCTGTTTCCATCAAATCCACTGCTTTCTCCAGACAAGAGTCGACGGATTCAAATGTGGGTTCGCCACCGAAGTTGGAGGGGAGGACTATATACTACCATGTTGCAGAGGATAATGGGGACGTGGATGATGAGAATGTGCAGGGTTATTCTTTGACTTTCAAAGGAAATGGGGTTGAGCAGTTGACTCGGAAGTTTGTGGAAGAGACGGGGCTTGAGGGAGTTATTGTGTGCACTCGAAGTCCTTTGAATGGAAAACTCTACCCTCTTCGCTTGCAGCTTCCTCCCAACAATGTCACCATGCAGGTTGTTTTGGTTCTTCCCTCGTCTAAAGTGGCAAGAGACTTTGAGGAGCAAGGTCTACTATGA | 1470 | 0.551 | MEYFNKAKAVKLRSHLGKYLVADDDHHKLRQSKNGSTRNSIWLVELVKGKSHHVRLRNSNGRYLTATEAPFLLGVTGNKVVQGSLGDGWNGKLEWEPITEGLHVKLRSWCGKYLRGNGGTLPWRNSITHDDPYASTTHDWILWAVEPLEFPDKLLSSPETHFPSSLESEDELRGSEEPGSSLLQSTSSDTMFRSGMELFHRAKVVRLRSHHDKYLLADEDEESVTQDRNGSSRNAKWTVELIPEFDNLLRLKSCYGKYLTASNQPLLLGVTGRKVVQSVPRQLDSSVEWEPVRDGAQVKLKTRYGNFLRANGGLPPWRNSVTHDIPHRTATQDWILWDVDVLEIHVESPAPPPIPHSDSLDFDSYTPSAVSIKSTAFSRQESTDSNVGSPPKLEGRTIYYHVAEDNGDVDDENVQGYSLTFKGNGVEQLTRKFVEETGLEGVIVCTRSPLNGKLYPLRLQLPPNNVTMQVVLVLPSSKVARDFEEQGLL* | 490 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu3g0735 | 489 | Gene3D | - | 204 | 323 | - | - | |
| Pvu3g0735 | 489 | Pfam | Domain of unknown function (DUF569) | 1 | 143 | IPR007679 | - | |
| Pvu3g0735 | 489 | Pfam | Domain of unknown function (DUF569) | 196 | 337 | IPR007679 | - | |
| Pvu3g0735 | 489 | PANTHER | ACTIN CROSS-LINKING PROTEIN | 184 | 486 | - | - | |
| Pvu3g0735 | 489 | PANTHER | ACTIN CROSS-LINKING PROTEIN | 1 | 151 | - | - | |
| Pvu3g0735 | 489 | Gene3D | - | 5 | 146 | - | - | |
| Pvu3g0735 | 489 | SUPERFAMILY | Actin-crosslinking proteins | 200 | 341 | IPR008999 | - | |
| Pvu3g0735 | 489 | MobiDBLite | consensus disorder prediction | 159 | 186 | - | - | |
| Pvu3g0735 | 489 | SUPERFAMILY | Actin-crosslinking proteins | 5 | 148 | IPR008999 | - | |
| Pvu3g0735 | 489 | PANTHER | ACTIN CROSS-LINKING PROTEIN (DUF569) | 184 | 486 | - | - | |
| Pvu3g0735 | 489 | PANTHER | ACTIN CROSS-LINKING PROTEIN (DUF569) | 1 | 151 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu3g0735 | Pvu-Chr3 | 10662778 | 10668947 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu3g0735 | - | - | gmx:100785006 | 839.721 |
Event-related genes