Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0836 ATGGAGTTTTTCACCAAAACCAACGTGGTGAGGCTGCGGAGCCACCTCGACAAGTATCTCGTGGCCGACGCCGACGGCAGCCACGTCCACCAGAGCCGCAAGGCCTCCGGCCGGGGAGCGCGGTGGACGGTAGAGGAGATAACGGAGGGAGGAACCGATAAGGTGCGCCTCAGGAGCTGCCACGGAAGGTACTTAACGGCGACGGAGGCACCGTTTCTGTTTGGGATGACAGGGAAGAAGGTGCTCCAGATGGAGTTCGAGCCCGGCGCTGATTTCAAGCACGACTGGGAAGTGACACGCGACGGTTTCCAGGTGAAGTTGATGAGTTGGAGCGGGAAGTTCCTGCGTGCGAACGGAGGGACACCGCCATGGCGGAGCAGCGTGACGGTGGACGAACCGCACAGTTCGGCGACGAAGGATTGGGTTCTGTGGGACGTGGAGACTGTGAAGGCGGTGGAAGAGTTGGTGGATGATTTGTGTGAGAGCGTGGTTTCGTCTCTCGCTTCCGATGATGTCTCGGTCGATTCGGAACCAGCGTCGCCGATGTCGGTTTTCGCGCTCAAGTCGCCGCCGGCGAGGCGGAACACGAAGCTGATGCTGCAGACAATAAGTTCGAACAAGTTCAGTACTGGCATGGACTTCTTCCACCGCGCGAAGGCGGTGCGTCTCCGCAGCCACCACGACAAGTACCTGCTGGCGGAGGAGGACGAAGAGTCGGTCACGCAAGCCCGCAAGGGGTCCTCGAAGAGCGCGCGGTGGATGGTCGAATACGTGTCCGAATACGACAACATAATTCGCCTGAAGAGCTGTTACGGCAAGTACCTCACAGCTTCCAACCAACTCTTCCTGCTGGGCATGACGGGCCACAAGGTCCTCCAGACGCTCCCGCAGAGGCTCGACTCCTCCGTCGAGTGGGAGCCCATCAAGGACGGAGGCCGCGTCAAGCTCAAGACTCGCTACGGCAACTTCCTCCGCGCCAATGGGGGCTTGCCGCCCTGGAGAAACTCCGTCACGCACGATATTCCTCACAGGACCGCCACGCAGGACTGGATCCTCTGGGACGTGGAAGTCGTCGAGATTTATGTCAACTCTCCGGCGAATAGCAGTAAACCCTCTGCTCCCCCGTTGCCGGTTTCCGACACTGTTCCAGTCCTGGCCAGCGCGCCGTTGCCCCCGCCGCCATCCTTGTCTGCCAGCTTTACAAGGCAACAGTCGAATGATTTGAATGGTTCGACGCCGAAGATGGAGGGGCGGATTATTTACTACCATATTGCAGAAGACAATGGAGAGGTGTTGGATGAAGGTGTGCAGGGTTATTCTTTGATTTTCAAAGGGAATGGAGTTGAAGAATTGACTCGAAAGTTTGAGGAAGAGACAGGGCTAGATGGAATCATTGTATGTAATCGGAGTCCTTTCAATAAAAAGCTTTATCCTCTTCGCTTGCAGCTTCCTCCAAACACCGTGACCATGCGGGTTGTTTTGGTTCTTCCTATGTCAAATGTGGCAAGAGACTTAGAGGCACAGGGCTTACTGTGA 1536 0.569 MEFFTKTNVVRLRSHLDKYLVADADGSHVHQSRKASGRGARWTVEEITEGGTDKVRLRSCHGRYLTATEAPFLFGMTGKKVLQMEFEPGADFKHDWEVTRDGFQVKLMSWSGKFLRANGGTPPWRSSVTVDEPHSSATKDWVLWDVETVKAVEELVDDLCESVVSSLASDDVSVDSEPASPMSVFALKSPPARRNTKLMLQTISSNKFSTGMDFFHRAKAVRLRSHHDKYLLAEEDEESVTQARKGSSKSARWMVEYVSEYDNIIRLKSCYGKYLTASNQLFLLGMTGHKVLQTLPQRLDSSVEWEPIKDGGRVKLKTRYGNFLRANGGLPPWRNSVTHDIPHRTATQDWILWDVEVVEIYVNSPANSSKPSAPPLPVSDTVPVLASAPLPPPPSLSASFTRQQSNDLNGSTPKMEGRIIYYHIAEDNGEVLDEGVQGYSLIFKGNGVEELTRKFEEETGLDGIIVCNRSPFNKKLYPLRLQLPPNTVTMRVVLVLPMSNVARDLEAQGLL* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0836 511 Gene3D - 220 340 - -
Pvu2g0836 511 PANTHER CROSS-LINKING PROTEIN, PUTATIVE (DUF569)-RELATED 206 498 - -
Pvu2g0836 511 PANTHER CROSS-LINKING PROTEIN, PUTATIVE (DUF569)-RELATED 1 195 - -
Pvu2g0836 511 Gene3D - 5 146 - -
Pvu2g0836 511 SUPERFAMILY Actin-crosslinking proteins 216 358 IPR008999 -
Pvu2g0836 511 Pfam Domain of unknown function (DUF569) 1 144 IPR007679 -
Pvu2g0836 511 Pfam Domain of unknown function (DUF569) 212 353 IPR007679 -
Pvu2g0836 511 SUPERFAMILY Actin-crosslinking proteins 7 146 IPR008999 -
Pvu2g0836 511 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 1 195 - -
Pvu2g0836 511 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 206 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0836 Pvu-Chr2 12167313 12175587 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0836 - - gmx:100811752 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0836 2 12167313 12175587 Pvu2g0836 2 12167313 12175587 ECH
Pvu2g0836 2 12167313 12175587 Pvu3g0735 3 10662778 10668947 PCT