Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0643 ATGCATGTTCTTTTCCCTGTGAAGAGACTCGCCTTCTCTGATCCTCTTTTGTCACACAGAAGAAGACTTTTTCGTTGGTTCAGTTTAGGTGTTGTAGCTTCTCTTCTTTTGTTGTCTCTCTTCATTCTTGGTAACTCCCTCAGGGTTTCCAAAGTTGCAGTCTTTGTTCCACAACTAAGCACTGTTGCTGCAAATTCTTCGCTTGCTTCTCGCCCCTTCTTACCTTTCAATAATACTAGCCACTCTTCTTCCTCTGGGAGCAGCACTTCTAACACTTCAAAGTCTGACGAGTACAAGAGTTCTGTGAAGGTTATTAAGGAAGGAAGTGTGGTAGTTGTGGATGGAAATGGAGCGAATCATGTGTTGGAGGAAACAAAGAGTGTCAGGGGTTTGCAGAATTATAGTTTTTCTTCTTATTTGTTGCCAGAGAGTAACAAAGGAAAGCATGAAGGGGATTTGGTTAGGGAAAACAGTTTAAGGAATGTAACTGTCACTCATAATGAGAAAATGCAGGTTGGTTTACATGAGGAATGTGACATTTTTGATGGAAAGTGGGTAAAAGATGGTTCAAAGCCATATTATCCTTTAGGGTCTTGTCCACATATTGATAGAGATTTTAACTGTCACCAGAATGGGAGGCCTGATGGAGAGTATGTTAAATGGAGGTGGCAGCCATATGGGTGCAAAATTCCAAGTTTGAATGCAACTGATTTTCTGGAGAGGTTGAGAGGACAGAGGCTGGTTTTTGTGGGGGATTCACTGAACAGGAACATGTGGGAGTCACTTGTATGCATTCTCCGTGAAAGTATCAGGAACAAGAAACGGGTATTTGAAATTTCGGGGAGAAGGGAATTTAAGAAGAAAGGTGTTTATTCTTTTAGATTTGAGGATTATAATTGTTCGGTGGACTTAGTTGTTTCGCCATTTATCGTTCAAGAGTCAACTTTCAAGTCCAAAAATGGATCATTTGAGACATTAAGATTGGATTTGATGGACTGGACTACGACCAGGTATGAAGATGCTAATATCATAGTCTTCAACACAGGACATTGGTGGACCCATAATAAAACATCAAAAGGAGAAGATTATTATCAGGAAGGAAACCATGTACACGCAAGACTCAAGGTTCTGGATGCATACACCAGAGCCTTGACCACTTGGGCTAAATGGGTTGACCGAAAAATCAATGCCAATCAAACTCAGGTTTTCTTCCGGGGATACTCAGTCACCCACTTCTGGGGTGGCCAATGGAATTCAGGAGGACAGTGCCATAAAGAAACTGAGCCAATATTTAATGAAACTTACTTACAAAAGTATCCTTTAAAAATGAGGGCTCTAGAAAGTGTGATCCAACAAATGAAAACCCCAGTAGTATATATGAATATAAGTAGGCTTACAGATTACAGAAAAGATGGGCATCCTTCAGTATACAGAAAGGGGTATAAGAAATCAATGGATCAGAACTCTACTGCACTATTCGAAGACTGCAGCCATTGGTGCTTGCCTGGGGTACCGGATACTTGGAATGAATTGCTATATGTTTCTCTCTTAAAATATGGAACGGGAACTTGGAAAAGCTGA 1581 0.4067 MHVLFPVKRLAFSDPLLSHRRRLFRWFSLGVVASLLLLSLFILGNSLRVSKVAVFVPQLSTVAANSSLASRPFLPFNNTSHSSSSGSSTSNTSKSDEYKSSVKVIKEGSVVVVDGNGANHVLEETKSVRGLQNYSFSSYLLPESNKGKHEGDLVRENSLRNVTVTHNEKMQVGLHEECDIFDGKWVKDGSKPYYPLGSCPHIDRDFNCHQNGRPDGEYVKWRWQPYGCKIPSLNATDFLERLRGQRLVFVGDSLNRNMWESLVCILRESIRNKKRVFEISGRREFKKKGVYSFRFEDYNCSVDLVVSPFIVQESTFKSKNGSFETLRLDLMDWTTTRYEDANIIVFNTGHWWTHNKTSKGEDYYQEGNHVHARLKVLDAYTRALTTWAKWVDRKINANQTQVFFRGYSVTHFWGGQWNSGGQCHKETEPIFNETYLQKYPLKMRALESVIQQMKTPVVYMNISRLTDYRKDGHPSVYRKGYKKSMDQNSTALFEDCSHWCLPGVPDTWNELLYVSLLKYGTGTWKS* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0643 526 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 18 523 IPR029962 GO:0016413
Pvu3g0643 526 Pfam PMR5 N terminal Domain 176 229 IPR025846 -
Pvu3g0643 526 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 230 513 IPR026057 GO:0016740
Pvu3g0643 526 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 2 18 523 IPR029967 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0643 Pvu-Chr3 8507707 8510682 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0643 - - gmx:100811395 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0666 2 7303885 7309138 Pvu3g0643 3 8507707 8510682 PCT