Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0666 ATGGACTCTTCTATGAGGCTTGCATTCTCGGAATCCTTTATGTCTCAGAAGAGAAAGGTAATTTCGGCCTTCAGTTTAGGCGTTGGAGTTTCTCTTCTTCTTCTTCTTACCGTTCTCAACAACACTTCACTCACTGTTCCCAAGGTTCAAGTGTTTCTCCAAGGGTCCGATTCCAATTCTTCATTTTCTTGGCGTTTTCCTTTTTCGGGCCGTTATTCCAATGGTTCCGTTAGTTCTCTGCATAGGGCTGAAGTGAACGTGTCCAGTGAGTGTTTGGAGAAGAAGACCCTTTTGGGGAACCTCACCGGGAATCGGAAAAATGCAAGCTTGCATGATGGGCATGAGGAGCATGAAGATTGTTGTTCTTTGAAGAATTTTACTGTGTCAGGGAAGGAAAATGGGCACGCGGGAAATTCGTCATGCAGCGGTGATGATGCTTTGGGAAAGTGTGAAGAAGGGTTGGTTAAGGCAAGTAATGGGAGTGTTGGTAGTTTGTTTGTGGAGTGTGACATCTTTGATGGGAAATGGGTGAGGGATGAGTCGAAACCGTACTATCCCTTGGGGTCTTGTCCTCTCATTGATAGGGATTTTGATTGCCATCTTAATGGGAGGCCTGATAGTGAGTATGTGAAGTGGAAATGGCAGCCGAATGGGTGTGACATTCCAAGTTTGAATGCAACTGATTTTCTGGAAAAGTTGCGAGGACAGAAGCTGGTTTTTGTGGGGGATTCGCTGAACAGGAACATGTGGGAGTCCATGGTGTGTATCCTGCGTCAAAGTGTCAAGGACAAGAAACGTGTTTTTGAAATTTCAGGAAAAACTGAATTTAAGAAGAAAGGTGTCTATGCTTTTAGATTTGAGGATTATAATTGTTCAGTAGATTTTGTTAGTTCGCCATTCATTGTTCGAGAGTCTACTTTCAAGGGCACAAATGGGTCCTTTGAGACATTAAGATTGGATTTGATGGATCAGACAACTAGCACCTATCATGATGCTGACATCATAGTCTTCAATACAGGTCATTGGTGGACTCACGAGAAAACATCTAGAGGAGAAGACTATTATCAAGAAGGCAACCATATATACCCCAGACTCAAAGTTCTGGATGCATATACAAGGGCATTGACCACTTGGGCTAAATGGATTGACAACAATATTGATGCCAATCGAACTCAGGTTTTCTTCAGAGGATACTCGGTCACCCATTTCAGGGGTGGGCAATGGAATTCAGGAGGACAGTGCCACAAAGAAACTGAGCCAATAACTGATGGAAAGCACTTGCGCAAGTATCCTTCGAAAATGAGGGCTTTGGAGCATGTGGTCATCCCAAAGATGAAAACCCCTGTGATATATATGAACATTAGTAGGCTTACAGATTACAGAAAAGATGGACATCCCTCTATATACAGAATGGAGTATAAGACACCAGAGGAGCAGGCCTCTGCTGAACTACACCAAGATTGCAGTCATTGGTGTTTGCCTGGAGTACCTGATACTTGGAATGAATTACTGTATGCTTCTCTCTTGAAATATGGAAAAGGCCATTGGAAAAGTTGA 1557 0.4322 MDSSMRLAFSESFMSQKRKVISAFSLGVGVSLLLLLTVLNNTSLTVPKVQVFLQGSDSNSSFSWRFPFSGRYSNGSVSSLHRAEVNVSSECLEKKTLLGNLTGNRKNASLHDGHEEHEDCCSLKNFTVSGKENGHAGNSSCSGDDALGKCEEGLVKASNGSVGSLFVECDIFDGKWVRDESKPYYPLGSCPLIDRDFDCHLNGRPDSEYVKWKWQPNGCDIPSLNATDFLEKLRGQKLVFVGDSLNRNMWESMVCILRQSVKDKKRVFEISGKTEFKKKGVYAFRFEDYNCSVDFVSSPFIVRESTFKGTNGSFETLRLDLMDQTTSTYHDADIIVFNTGHWWTHEKTSRGEDYYQEGNHIYPRLKVLDAYTRALTTWAKWIDNNIDANRTQVFFRGYSVTHFRGGQWNSGGQCHKETEPITDGKHLRKYPSKMRALEHVVIPKMKTPVIYMNISRLTDYRKDGHPSIYRMEYKTPEEQASAELHQDCSHWCLPGVPDTWNELLYASLLKYGKGHWKS* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0666 518 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 11 516 IPR029962 GO:0016413
Pvu2g0666 518 Pfam PMR5 N terminal Domain 168 220 IPR025846 -
Pvu2g0666 518 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 221 506 IPR026057 GO:0016740
Pvu2g0666 518 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 11 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0666 Pvu-Chr2 7303885 7309138 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0666 - - gmx:100804622 912.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0666 2 7303885 7309138 Pvu3g0643 3 8507707 8510682 PCT
Pvu3g2151 3 42288907 42292697 Pvu2g0666 2 7303885 7309138 PCT