Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0582 ATGGCTCTATCGCGAGTTGCTTCGTCATCGCCGTCGAATATATTGAAACCCATATCCTCTTACTTGTCGCTACGGCGACGTTCGGTGTCCTCCTCCTCCACGGAACCTCTCACCGTGGAGACTTCACTTCCCTTCACCGCCCACCGCTGCGACGCGCCCTCACGCGCCGTCGAGACCTCCGGGGCGGAGCTTTTCTCGTTCTTCCGCGATATGGCGCTGATGCGGCGGATGGAGATCGCGGCGGACTCCCTCTACAAGGCCAAGCTGATCCGCGGCTTCTGCCACCTCTACGACGGTCAGGAGGCCGTCGCGGTGGGGATGGAGGCTGCGATCACGCGTAAGGACTGCGTCATCACCGCCTACCGCGACCACTGCACCTTCCTAAGCCGCGGCGGAAGCCTGATCGAGGTCTTCGCCGAGCTCATGGGCCGCCGCGACGGCTGCTCCAAAGGGAAAGGTGGTTCCATGCACTTTTACAGGAAAGAGGGTGGCTTCTACGGTGGGCATGGCATTGTTGGGGCTCAGGTTCCGCTTGGTTGTGGATTGGCTTTTGCTCAGAAGTATTCTAAGGATGAGAATGTTACGTTTTCTATGTACGGTGATGGTGCTGCCAATCAGGGGCAGTTGTTCGAGGCGCTTAACATTTCTGCGCTTTGGGATCTTCCTTCCATTTTGGTCTGCGAGAATAATCATTATGGAATGGGGACTGCTGAGTGGAGAGCTGCTAAGAGTCCTGCTTATTACAAGCGTGGGGATTATGTTCCTGGATTGAAGGTAGATGGCATGGATACTCTTGCTGTTAAACAAGCTTGTAAATTTGCGAAGGAGTTTGCCTTGAAGAATGGCCCCATTATTCTTGAAATGGATACATACAGATACCATGGCCACTCCATGTCTGATCCAGGCAGCACATACCGCACTCGTGATGAAATTTCTGGTGTGAGACAGGAGCGTGATCCAATTGAAAGAGTAAGAAAGCTGCTATTGGTTCATGATATATCTACTGAAAAGGAGCTAAAGGACATTGAGAAAGAAGCAAGAAAAGAAGTTGACGAAGTCATTGCCAAAGCAAAGGAAAGTCAAATGCCTTAG 1092 0.5238 MALSRVASSSPSNILKPISSYLSLRRRSVSSSSTEPLTVETSLPFTAHRCDAPSRAVETSGAELFSFFRDMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRKDCVITAYRDHCTFLSRGGSLIEVFAELMGRRDGCSKGKGGSMHFYRKEGGFYGGHGIVGAQVPLGCGLAFAQKYSKDENVTFSMYGDGAANQGQLFEALNISALWDLPSILVCENNHYGMGTAEWRAAKSPAYYKRGDYVPGLKVDGMDTLAVKQACKFAKEFALKNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLLLVHDISTEKELKDIEKEARKEVDEVIAKAKESQMP* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0582 363 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 63 363 IPR017597 GO:0004739|GO:0006086|GO:0043231
Pvu3g0582 363 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA, MITOCHONDRIAL 8 363 - -
Pvu3g0582 363 Pfam Dehydrogenase E1 component 70 362 IPR001017 GO:0016624
Pvu3g0582 363 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 53 361 IPR029061 -
Pvu3g0582 363 CDD TPP_E1_PDC_ADC_BCADC 67 357 - -
Pvu3g0582 363 Gene3D - 19 363 - -
Pvu3g0582 363 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 8 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0582 Pvu-Chr3 7220482 7225750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0582 1 363 Acyl Lipid Metabolism Gene Families AT1G24180 79.396 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0582 K00161 - gmx:100813933 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0582 3 7220482 7225750 Pvu3g0582 3 7220482 7225750 ECH
Pvu2g0802 2 11488642 11495317 Pvu3g0582 3 7220482 7225750 PCT