Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0802 ATGGCTCTCTCAACTCTCTCTCGCCGCGGCCTCGGATCTACTCTCTTCAAGCCCCTATCCGCCGCCGTCTCCTCCCGCTCGATCTCCTCCGATGCCCCCCTCACCATCGAGACCTCTGTTCCCTTCACCGCGCACAATTGCGAGGCTCCCTCACGCGCCGTTACCACCTCCTCCTCCGAGCTCCTTTCCTTCTTCCGTCAGATGGCCCTCATGCGCCGAATGGAGATCGCCGCCGACTCCCTCTACAAGGCCAAACTCATCCGCGGATTCTGCCACCTCTACGACGGCCAGGAAGCCGTCGCCATCGGTATGGAGGCCGGCATCACCAGAAAAGACTGCATCATCACCGCCTACCGCGACCACTGCACCTTCCTCGGCCGCGGCGGCTCGCTGCTCGAGATTTTCGCGGAGCTGATGGGGCGCAAGGAGGGGTGCTCGAAGGGGAAAGGGGGTTCGATGCACTTTTATAGGAAGGAGGGTGGATTCTACGGTGGGCACGGGATCGTGGGGGCGCAGGTTCCGTTAGGGTGTGGTTTAGCTTTTGCTCAGAAGTATAGTAAGGATGAGACTGTGACTTTTGCCTTGTATGGAGATGGGGCTGCCAATCAGGGACAGCTTTTTGAGGCGCTTAACATTGCTGCTCTTTGGGATCTTCCTGCTATCTTGGTCTGCGAGAATAATCACTATGGGATGGGGACTGCGGAGTGGAGAGCTGCAAAGAGTCCTGCTTATTACAAGCGTGGGGATTATGTGCCTGGCTTGAAGGTAGATGGCATGGACGTTCTTGCTGTTAAGCAAGCTTGCAAATTTGCAAAAGAACATGCCTTGAAGAATGGGCCCCTTATTCTTGAAATGGATACTTATAGATACCATGGTCACTCTATGTCTGATCCTGGCAGCACATACCGCACACGTGATGAAATATCTGGTGTGAGACAGGAGCGGGATCCAATTGAGAGAGTAAGAAAGCTGTTATTGTCTCATGACATTGCTGCTGAAAAGGAGCTAAAGGACATTGAAAAAGAAGTCAGAAAAGAAGTTGACGAAGCCATTGCTAAAGCAAAGGAGAGTCCAGTGCCAGATCCATCTGAGTTATTTAGCAATGTGTACGTTAAAGGTTTAGGAGTTGAGGCATTTGGTGTTGATAGGAAAGTACTGAGAGCTACTTTACCATAA 1176 0.5247 MALSTLSRRGLGSTLFKPLSAAVSSRSISSDAPLTIETSVPFTAHNCEAPSRAVTTSSSELLSFFRQMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAGITRKDCIITAYRDHCTFLGRGGSLLEIFAELMGRKEGCSKGKGGSMHFYRKEGGFYGGHGIVGAQVPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKEHALKNGPLILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLLLSHDIAAEKELKDIEKEVRKEVDEAIAKAKESPVPDPSELFSNVYVKGLGVEAFGVDRKVLRATLP* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0802 391 MobiDBLite consensus disorder prediction 294 313 - -
Pvu2g0802 391 CDD TPP_E1_PDC_ADC_BCADC 64 354 - -
Pvu2g0802 391 Pfam Dehydrogenase E1 component 67 362 IPR001017 GO:0016624
Pvu2g0802 391 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA, MITOCHONDRIAL 8 391 - -
Pvu2g0802 391 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 8 391 - -
Pvu2g0802 391 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 49 372 IPR029061 -
Pvu2g0802 391 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 59 371 IPR017597 GO:0004739|GO:0006086|GO:0043231
Pvu2g0802 391 Gene3D - 20 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0802 Pvu-Chr2 11488642 11495317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0802 1 391 Acyl Lipid Metabolism Gene Families AT1G24180 80.000 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0802 K00161 - gmx:100816737 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0802 2 11488642 11495317 Pvu2g0802 2 11488642 11495317 ECH
Pvu2g0802 2 11488642 11495317 Pvu3g0582 3 7220482 7225750 PCT