Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3259 ATGAGTAGTAGCAAGAGAAGATTCAATTCTGTTCATCTTCAAGAGGCTGCAGAGGACTTGTTAAACCATGTGGTGAAGGTGAAGGAGAACATGGGTTGGATTTCGCTCCTCTTCCCACTCATTTTCATTGCTTGGGCTATTCACACATGGCTATTTTCTTTCTCCAATTGGCTTTCCCTTGCCCTTGCTCTGTGGGCTTCTATGCAATATGGGAAGTATCAGCGCAAGCTACTGGAGGAAGACTTGAATAAGAAATGGAATCGGATCCTACTCAACACCTCGCCAGTGACACCGTTGGAGCACTGCGACTGGTTGAATCTGCTATTGACGCAAATATGGTCCAACTATTTTAATCCCAAGTTCTCAAGAAGCTTGTCAGCCATAGTTGAAAAACGTTTGAAGCTCCGAAAACCAAGATTTATAGAAAAAGTTGAGGTGCAAGACTTTTCACTTGGATCATGCCCTCCAAGTTTGGGTCTTCAAGGGATGCGATGGTCAACCTCTGGTGGTCAGCGAGTCCTGAAATTGAGTTTTGATTGGGATACAAGCGAGATGAACATTTTGATGCTTGCTAAGCTTTCCGTTGGAGCTGCCAAAATTGTGATTAACAATCTTCATATCAAGGGTGAGCTTTTGGTGACTCCAATTCTAGATGGAAATGCACTTTTGTATTCATTTTCATCCACACCTGAGGTGAGAATAGGAATTGCCTTTGGAAGCGGAGCAAGCCAATCAGCCACTGAGTTGCCCGGGGTTTCTCCATGGCTGGATAAACTTTTTACTGATACATTGGTTAAAACCATGGTGGAACCTCGACGCCGTTGTTTCAGTTTGCCTGTGGTTAATTTGAGGAAAACTGCTGTTGGAGGCATGATATATGTGTCAGTGATTTCAGCAAACAAACTTTCTTGGAGTTGCTTCAAGAGTAGCCGATCTTTGAGGCAACAGAATAGCACAGTCAGTGGATTTTCAGAAACAAACCTGGATGACAAGGACCTACAGACATTTGTAGAGGTTGAGGTGGAGGAATTGACCAGGAGGACGGGTCATAGTCATGGTTCAAATCCAACATGGGATACAACATTTAATATGGTTTTACATGATAATACAGGAATTGTTCGCTTCAATCTTTACGAGTGTCCCTCTAGCGGTGTAAAGTGTGACCACCTAGCAAGTTGTGAAATCAAGATGAGGCATGTTGAAGATGATTCAACAATAATGTGGGCAATAGGACCTGACTCTAGTGCAATAGCGAAACATGCAAAGTTTTGTGGAGATGAAGTTGAAATGGTTGTCCCATTTGAGGGCACCAACTCAGCAGAGTTAAAGGTGAAGATTGTAGTAAAAGAGTGGCAGTTTTCTGATGGTTCACATAGCTTGAACAACCTCCGTGCTAATTCTCAGCGATCACTTATTGGATCATCAACTCTTCTGTCTAAAACTGGAAGGAAACTTAAGATAACAATTGTAGAAGCAAAGGGTCTCGTTACAAAAGACAAATCTGGAAAAGTTAGCCCATACGTTAAATTGCAATATGGAAAGGTTGGTAAGAGAACAAAGGTTGCTCCTTCTACTACTAGTACTACTACTACAAATCCTGTCTGGAATGAATCATTTGATTTTGATGAGAATGATGGTGATGAATACCTAAATGTAAAATGCTTCAGTGAAGAAATTTTTGGAGATGAAAATATTGGTACTGCCAATGTAAATTTGGAAGGACTGGGGGACGGGTCAACCAAGGATGAATGGATCCCTCTTGAAGGAGTGAGTTCTGGTGAATTAAGACTTAAAATTGAAGTAGTTAGGGTGCAGGACCAAGAAGGATCAAGGGGGTCAGCCAATGGTTGGATAGAACTTGTTGTAATTGAAGCAAGAGATCTTATTGCTGCCGATCTTCGAGGGACAAGTGATCCTTATGTGAGGGTGAACTATGGAAATTTGAAGCGGAGGACAAAGGTTATACACAAAACTCTCAACCCTCGTTGGAACCAAACCTTAGAGTTCCTTGACAATGGCAGTCCCCTGACCATGCATGTTAGGGACCACAATGCTTTATTACCCACATCAAGTATAGGGGAGTGTGTTGTAGAATATCAAAGGTTGCCTCCAAACCAGATGTCTGACAAATGGATACCTCTCCAAGGGGTAAAAAGTGGCGAGATACACATCCAAATTACAAGAAAAGTTCCAGAGATGCAAACAAGAAGTTCTCTAGACTCTCAACCATCTTCGTTAAGTAAATCACACCAAATTCCTACCCAGATGAGAGAGATGTTGAAAAAGTTTCGATCATTAATAGAGGATGGAAATCTTGAAGGACTGACAACAACTTTGAGCGAGTTAGAAAGTCTAGAGGATACAATGGAAGGGTACGTAGCACAGCTGGAGACCGAGCAAATGCTTCTTCCGAGCAAAATAAAAGATCTGGGTCAGGAGTTCCTCAATTCTTCTTCTTCCCTCTCTAGTAGTCCTTCTCAAAATGCAAATTAA 2493 0.4192 MSSSKRRFNSVHLQEAAEDLLNHVVKVKENMGWISLLFPLIFIAWAIHTWLFSFSNWLSLALALWASMQYGKYQRKLLEEDLNKKWNRILLNTSPVTPLEHCDWLNLLLTQIWSNYFNPKFSRSLSAIVEKRLKLRKPRFIEKVEVQDFSLGSCPPSLGLQGMRWSTSGGQRVLKLSFDWDTSEMNILMLAKLSVGAAKIVINNLHIKGELLVTPILDGNALLYSFSSTPEVRIGIAFGSGASQSATELPGVSPWLDKLFTDTLVKTMVEPRRRCFSLPVVNLRKTAVGGMIYVSVISANKLSWSCFKSSRSLRQQNSTVSGFSETNLDDKDLQTFVEVEVEELTRRTGHSHGSNPTWDTTFNMVLHDNTGIVRFNLYECPSSGVKCDHLASCEIKMRHVEDDSTIMWAIGPDSSAIAKHAKFCGDEVEMVVPFEGTNSAELKVKIVVKEWQFSDGSHSLNNLRANSQRSLIGSSTLLSKTGRKLKITIVEAKGLVTKDKSGKVSPYVKLQYGKVGKRTKVAPSTTSTTTTNPVWNESFDFDENDGDEYLNVKCFSEEIFGDENIGTANVNLEGLGDGSTKDEWIPLEGVSSGELRLKIEVVRVQDQEGSRGSANGWIELVVIEARDLIAADLRGTSDPYVRVNYGNLKRRTKVIHKTLNPRWNQTLEFLDNGSPLTMHVRDHNALLPTSSIGECVVEYQRLPPNQMSDKWIPLQGVKSGEIHIQITRKVPEMQTRSSLDSQPSSLSKSHQIPTQMREMLKKFRSLIEDGNLEGLTTTLSELESLEDTMEGYVAQLETEQMLLPSKIKDLGQEFLNSSSSLSSSPSQNAN* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3259 830 ProSiteProfiles C2 domain profile. 466 585 IPR000008 -
Pvu2g3259 830 ProSiteProfiles C2 domain profile. 591 712 IPR000008 -
Pvu2g3259 830 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 483 603 IPR035892 -
Pvu2g3259 830 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 98 279 IPR031468 GO:0008289
Pvu2g3259 830 CDD C2 618 714 - -
Pvu2g3259 830 PANTHER OS01G0128800 PROTEIN 1 824 - -
Pvu2g3259 830 Gene3D C2 domain 605 729 IPR035892 -
Pvu2g3259 830 Gene3D C2 domain 469 604 IPR035892 -
Pvu2g3259 830 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 286 405 IPR035892 -
Pvu2g3259 830 SMART C2_3c 617 711 IPR000008 -
Pvu2g3259 830 SMART C2_3c 291 409 IPR000008 -
Pvu2g3259 830 SMART C2_3c 484 584 IPR000008 -
Pvu2g3259 830 CDD C2 485 587 - -
Pvu2g3259 830 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 613 727 IPR035892 -
Pvu2g3259 830 Pfam C2 domain 294 403 IPR000008 -
Pvu2g3259 830 Pfam C2 domain 484 587 IPR000008 -
Pvu2g3259 830 Pfam C2 domain 618 714 IPR000008 -
Pvu2g3259 830 Gene3D C2 domain 289 430 IPR035892 -
Pvu2g3259 830 Coils Coil 782 802 - -
Pvu2g3259 830 PANTHER PLANT SYNAPTOTAGMIN 1 824 - -
Pvu2g3259 830 MobiDBLite consensus disorder prediction 732 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3259 Pvu-Chr2 47721120 47727443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3259 485 728 Lipid Metabolism Gene Families AT3G61300 25.090 3.29e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3259 - - ccaj:109803570 1382.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1656 4 43852387 43860136 Pvu2g3259 2 47721120 47727443 ECH
Pvu2g3259 2 47721120 47727443 Pvu2g3259 2 47721120 47727443 ECH
Pvu2g3259 2 47721120 47727443 Pvu4g1656 4 43852387 43860136 PCT