Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3258 ATGCGTTTGAACCTCACAAATGCTTTACTATCATCACTCCCACTCGCTTTACCCTCTTCCCACGCTCTCTTCGCCTCTTCCAAATTCAAATTCACATTCACACTCGGAATTTGCATTCGAGTTCGCGCTCTCAACACCTTCTCCTCCCTCCAAACCACTCGCCACGACGACCACGACGATTTGTTCGCCCCTATTCCCTCTCCCCGCCACGTTGACAAAGCCACCAACGCCATCGAGAGAATCGCCCTACGCTTGCGGAACTTAGGGTTAGCCTCCGCCGACCACGCCGACGGCGACGATTTCCTCCGCCGCGAATGGCTTCGTCCCGACGAGGCGCTTTTGCCGTGGGACAAGCGAGAAGGGGAAGAGTACGAGGAGCACGAGGAACGGCAGAAGGAGAAGCCAAAGAAGAAGAGTGTTAATGCAGCGACACTGGCGGAGAAAACGCTGGAGGAGGAGGAGCTGCGGCGGTTGCGAACGCTGGGAATGAGTCTTAAGGAGAAGGTCACTATCCCCAAAGCTGGCCTGACCCGAGCCGTTCTCGACAAGATTCATCGTCAGTGGAGCAACTGCGAGTTGGTGAGGCTCAAGTTTCACGAGTTTCTTGCTCAGAACATGAAGTTGGCTCATCAAATTGTCGAGTGTAGAACTAGAGGGTTAGTTATATGGAGGTCGGGGAGTTATATGTGGGTATACCGAGGTAAAAATTACCAAGGGCCGATGCAACCAAATGAAAAGGACGGAGATGATCAAATTCCTGTGGTGGCGGATGGTGATGCAGCGCTGTTGCTGGAAAAGAGTGAGGCAGTTTTCTGGAAGGAGGAGAACATGACTCCAGAAGAAGTGGAGTTTAACAGGATGCTTGATGACTTTGGTCCTCGTTTTGTTGAATGGTGGGGCACCGGAATACTTCCAGTTGATGCTGATTTGCTTGCCCCCACAGTTCCTGGTTACAAGACGCCTCTTAGGCTTCTTCCTGCTGGAATGCGTCCACGACTGACCAATGATGAACTCACGAATATGCGGAAACATTCTAAATCTCTTCCTTGTCACTTTGCCTTAGGGAGAAATAGAAATCTTCAAGGTCTGGCATCTGCTATTCTCAGGCTTTGGGAGAAAAGTTTAGTTGCTAAGATTGGAGTCAAGCGTGGTATTGTGAATACAAACAATGAACTGATGGCTCAGGAGCTGAAGAAATTAACAGGAGGTACTTTACTTCTGCGGAACAAATATTACATTGTAATATATCGTGGGAGGGATTTTGTTCCAACCAGTGTGGCTGCTGTTATTGCTGAAAGACAGGAAATGACAAAACATGTGCAGCATGTTGAGGAGAAGGTGCGGTGCAAAGTTCATGACATAGCTCCTTCAAGGGAAGATGAATCAAAATCCCAAGCAGGATCATTGGCTGAGTTCTTTGAGGCTCAGGCATGCTGGGGAAGGGATATATCTACTGAAGAACGTGAGAGGATGAGGCAAGAGGTTACCAAAGCCAAGAATGATAAGCTTGCCCAAAAAAATGAATGTAAACTAGCTGTTGCCAAAGCCAAAAGGCTTACAGCAGAAAAGCTATTAGCGAAAATAGAAGCATCTTTGGTTCCAGTTGGTCCTGATTTTGACAAGGAAACAATCACAGATGAAGAACGTGTTATGTTCCGTTCAGTTGGTTTGAGAATGAAGGCATACTTGCCACTTGGTATACGTGGTGTTTTTGATGGTGTCATTGAGAATATGCATTTGCACTGGAGGCATCGAGAACTTGTTAAATTAATAACAAAGCAAAAGACCCTTGCTTTTGTTGAAGACACAGCTAGGTTACTGGAATATGAGAGTGGTGGAATACTAGTAGCAATAGATGAAGTTCCTAAAGGATTTTCTCTTATTTACTATCGTGGAAAGAATTATAGGCGACCTGTGACTCTAAGGCCTAAAAATCTTCTAACAAAGGCAAAGGCATTGCAGCGATCAATAGCCATGCAACGGCATGAGGCTCTGAGTCAGCATGTCACTGAATTGGTGGGAAAAATAGAAAAAATGAAAAAAGAACTTAGTGAGGATGAATTCTCTGACGGAGATGACAATCGTGGTGATTTCAATGGCGAGGAACACACTGATTACAAGGACGAGGATTCTGAATTTTAG 2142 0.4631 MRLNLTNALLSSLPLALPSSHALFASSKFKFTFTLGICIRVRALNTFSSLQTTRHDDHDDLFAPIPSPRHVDKATNAIERIALRLRNLGLASADHADGDDFLRREWLRPDEALLPWDKREGEEYEEHEERQKEKPKKKSVNAATLAEKTLEEEELRRLRTLGMSLKEKVTIPKAGLTRAVLDKIHRQWSNCELVRLKFHEFLAQNMKLAHQIVECRTRGLVIWRSGSYMWVYRGKNYQGPMQPNEKDGDDQIPVVADGDAALLLEKSEAVFWKEENMTPEEVEFNRMLDDFGPRFVEWWGTGILPVDADLLAPTVPGYKTPLRLLPAGMRPRLTNDELTNMRKHSKSLPCHFALGRNRNLQGLASAILRLWEKSLVAKIGVKRGIVNTNNELMAQELKKLTGGTLLLRNKYYIVIYRGRDFVPTSVAAVIAERQEMTKHVQHVEEKVRCKVHDIAPSREDESKSQAGSLAEFFEAQACWGRDISTEERERMRQEVTKAKNDKLAQKNECKLAVAKAKRLTAEKLLAKIEASLVPVGPDFDKETITDEERVMFRSVGLRMKAYLPLGIRGVFDGVIENMHLHWRHRELVKLITKQKTLAFVEDTARLLEYESGGILVAIDEVPKGFSLIYYRGKNYRRPVTLRPKNLLTKAKALQRSIAMQRHEALSQHVTELVGKIEKMKKELSEDEFSDGDDNRGDFNGEEHTDYKDEDSEF* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3258 713 MobiDBLite consensus disorder prediction 118 145 - -
Pvu2g3258 713 Gene3D - 149 249 IPR035920 -
Pvu2g3258 713 Gene3D - 332 427 IPR035920 -
Pvu2g3258 713 Gene3D - 543 643 IPR035920 -
Pvu2g3258 713 ProSiteProfiles CRM domain profile. 331 428 IPR001890 GO:0003723
Pvu2g3258 713 Pfam CRS1 / YhbY (CRM) domain 333 417 IPR001890 GO:0003723
Pvu2g3258 713 Pfam CRS1 / YhbY (CRM) domain 545 631 IPR001890 GO:0003723
Pvu2g3258 713 Pfam CRS1 / YhbY (CRM) domain 150 233 IPR001890 GO:0003723
Pvu2g3258 713 MobiDBLite consensus disorder prediction 683 713 - -
Pvu2g3258 713 SUPERFAMILY YhbY-like 543 641 IPR035920 -
Pvu2g3258 713 ProSiteProfiles CRM domain profile. 148 244 IPR001890 GO:0003723
Pvu2g3258 713 PANTHER (CRM) DOMAIN PROTEIN, PUTATIVE-RELATED 3 704 - -
Pvu2g3258 713 MobiDBLite consensus disorder prediction 683 706 - -
Pvu2g3258 713 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 3 704 IPR045278 GO:0000375|GO:0003729
Pvu2g3258 713 Coils Coil 481 508 - -
Pvu2g3258 713 SUPERFAMILY YhbY-like 333 424 IPR035920 -
Pvu2g3258 713 SMART CRS1_YhbY_2 333 417 IPR001890 GO:0003723
Pvu2g3258 713 SMART CRS1_YhbY_2 150 233 IPR001890 GO:0003723
Pvu2g3258 713 SMART CRS1_YhbY_2 544 631 IPR001890 GO:0003723
Pvu2g3258 713 SUPERFAMILY YhbY-like 149 242 IPR035920 -
Pvu2g3258 713 Coils Coil 662 682 - -
Pvu2g3258 713 ProSiteProfiles CRM domain profile. 542 642 IPR001890 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3258 Pvu-Chr2 47715426 47720359 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3258 - - vra:106765477 1189.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3258 2 47715426 47720359 Pvu2g3258 2 47715426 47720359 ECH
Pvu2g3258 2 47715426 47720359 Pvu4g1657 4 43862415 43868629 PCT