Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3072 ATGCCAACGATTCTGGTTACCGGTGGTGCCGGATACATCGGTAGCCACACCGTCCTCCAGCTTCTCCTCGCCGGTTACAATGTCTTCGCCGTCGACAACTTCGACAACTCCAGCGCAGTCGCCATCATCAGAGTCAAGGAACTTGCTGGAAAATTCGCAAATAACCTTTCCTTCGTCGAGTTAGACTTGCGGAACAGAGCTGCGCTCGAGAAAGTTTTTACAACCGCAAAGTTTGATGCTGTCATACATTTTGCTGGGCTGAAAGCAGTGGGTGAAAGTGTGCGGAAACCACTACTCTACTTTGATAACAACTTGATTGGGACAATCATTTTATTTCAAGTCATGGCTGCCCATGGATGTAAAAAGCTTGTGTTCTCATCTTCAGCAACTGTATATGGCTGGCCAAAGGAGGTTCCATGTACTGAAGAATTCCCTTTGTCAGTGACAAACCCATATGGACGGACCAAGCTTATCATCGAAGAGATTTGTCGTGATCTCTACTGTTCAGATTCAGATTGGAAAATTATACTGTTGAGATACTTCAACCCAGTTGGTGCACATCCTAGTGGTTCTATTGGTGAGGATCCTCGTGGAATTCCGAACAATCTCATGCCCTTTGTTCAACAAGTGGCAGTTGGCAGACTCACTTCACTGACAATTTTTGGAAACGATTATAAAACCAGTGACGGCACTGGAATTCGTGATTACATTCATGTTCTTGACTTAGCAGAAGGGCACATTGCTGCTTTGCGTAAACTGGATGATGCTAAAATAGGTTGTGAAGTTTATAACTTGGGAACAGGAAAGGGAACATCAGTTTTGGAGATGGTAAAGGCTTTTGAACAGGCCTCTGGAAAGAAAATTCCACTTGCAATGGGTGGCCGTAGACCTGGAGATGCTGAAATTGTTTATGCTTCAACGAAGAAAGCGGAAAGAGAACTCAATTGGAAGGCTAAACATGGCATCGATGATATGTGTCGGGATCAATGGAACTGGGCTAGCAAAAACCCTTATGGCTATGGTAGATCTGGAGATTCCTCCAACTGA 1047 0.447 MPTILVTGGAGYIGSHTVLQLLLAGYNVFAVDNFDNSSAVAIIRVKELAGKFANNLSFVELDLRNRAALEKVFTTAKFDAVIHFAGLKAVGESVRKPLLYFDNNLIGTIILFQVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSVTNPYGRTKLIIEEICRDLYCSDSDWKIILLRYFNPVGAHPSGSIGEDPRGIPNNLMPFVQQVAVGRLTSLTIFGNDYKTSDGTGIRDYIHVLDLAEGHIAALRKLDDAKIGCEVYNLGTGKGTSVLEMVKAFEQASGKKIPLAMGGRRPGDAEIVYASTKKAERELNWKAKHGIDDMCRDQWNWASKNPYGYGRSGDSSN* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3072 348 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 339 IPR036291 -
Pvu2g3072 348 TIGRFAM galE: UDP-glucose 4-epimerase GalE 4 338 IPR005886 GO:0003978|GO:0006012
Pvu2g3072 348 PANTHER UDP-GLUCOSE 4-EPIMERASE 2-LIKE 3 341 - -
Pvu2g3072 348 Pfam GDP-mannose 4,6 dehydratase 5 328 IPR016040 -
Pvu2g3072 348 CDD UDP_G4E_1_SDR_e 3 332 IPR005886 GO:0003978|GO:0006012
Pvu2g3072 348 Gene3D - 192 333 - -
Pvu2g3072 348 Gene3D - 4 273 - -
Pvu2g3072 348 PANTHER UDP-GLUCOSE 4-EPIMERASE 3 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3072 Pvu-Chr2 46126946 46131610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3072 3 317 Miscellaneous Gene Families AT4G00110 28.060 1.18e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3072 K01784 - gmx:100812565 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1695 2 30634445 30639105 Pvu2g3072 2 46126946 46131610 PCT