Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1695 ATGGCATCGCGCGTCAGCAATGGCAACATCACCTCCTCCACGCCACCGTATGTTATTAATTCACCTCGTTTTCGTTCACCACATAAGCTTTCTAACTCTCCTTCTCACCAAAACGCTGCGCATCATAACAACCTCATGCTCCACAAAACCGTCCTGGTGACCGGCGGAGCCGGTTACATCGGCAGCCACACCGTTCTTCAGCTGCTCCTCGGCGGTTTCACAACCGTCGTCGTCGATAACCTCGACAATTCCTCCGAGGTTGCCATCCGTAGAGTCCGGGAGCTAGCCGGCGAGTTTGGGAATAACCTATCCTTCCACAAGGTGGACCTACGGGACAGAGCTGCACTAGAGCAAATTTTTGTTTCCACACAGTTTGATGCGGTCATACATTTTGCTGGACTGAAAGCAGTAGGAGAAAGTGTGAAAAAACCTTTACTATACTACAACAACAACTTGACTGGAACAATCACTCTATTGGAAGTCATGGCTGCCCATGGATGCAAAAAGCTTGTGTTCTCGTCTTCAGCAACTGTGTATGGTTGGCCAAAGGAGGTTCCATGTACAGAAGAGTTCCCTCTGTCAGCGATGAATCCGTATGGTCGAACTAAGCTTATCATTGAAGAAATTTGTCGTGATGTCCACCATGCGGAACCAGATTTGAAAATAATATTGTTAAGGTATTTCAACCCAGTTGGTGCACACCCTAGTGGTTATATTGGGGAGGATCCTCGAGGAATTCCAAACAATCTCATGCCATTTGTTCAGCAAGTAGCAGTTGGCAGACGGCCTACGCTGACAGTTTTTGGAAATGATTATAATACAGTTGATGGCACTGGGGTTCGGGATTATATTCATGTTGTTGATTTAGCAGATGGGCACATTGCTGCATTACTTAAACTTGACGAACCTAGTATAGGTTGTGAGGTTTATAACCTGGGAACAGGAAAAGGAACATCGGTTTTGGAGATGGTTAGTGCTTTTGAAACAGCATCTGGAAAGAAAATTCCTCTTGTGATGGCTGGTCGTAGACCTGGTGATGCTGAAATTGTTTATGCATCCACTAAAAAAGCGGAAAGAGAGCTTAAATGGAAGGCAAAATATGGCATTGATGAGATGTGTCGTGATCAATGGAATTGGGCTAGCAAAAACCCTTACGGCTATGGAGATCAGGAGGACTCCAGCGATTAA 1188 0.4571 MASRVSNGNITSSTPPYVINSPRFRSPHKLSNSPSHQNAAHHNNLMLHKTVLVTGGAGYIGSHTVLQLLLGGFTTVVVDNLDNSSEVAIRRVRELAGEFGNNLSFHKVDLRDRAALEQIFVSTQFDAVIHFAGLKAVGESVKKPLLYYNNNLTGTITLLEVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSAMNPYGRTKLIIEEICRDVHHAEPDLKIILLRYFNPVGAHPSGYIGEDPRGIPNNLMPFVQQVAVGRRPTLTVFGNDYNTVDGTGVRDYIHVVDLADGHIAALLKLDEPSIGCEVYNLGTGKGTSVLEMVSAFETASGKKIPLVMAGRRPGDAEIVYASTKKAERELKWKAKYGIDEMCRDQWNWASKNPYGYGDQEDSSD* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1695 395 PANTHER UDP-GLUCOSE 4-EPIMERASE 46 389 - -
Pvu2g1695 395 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 46 387 IPR036291 -
Pvu2g1695 395 Gene3D - 239 380 - -
Pvu2g1695 395 Pfam GDP-mannose 4,6 dehydratase 52 375 IPR016040 -
Pvu2g1695 395 PANTHER UDP-GLUCOSE 4-EPIMERASE 5 46 389 - -
Pvu2g1695 395 Gene3D - 51 320 - -
Pvu2g1695 395 TIGRFAM galE: UDP-glucose 4-epimerase GalE 51 385 IPR005886 GO:0003978|GO:0006012
Pvu2g1695 395 MobiDBLite consensus disorder prediction 1 39 - -
Pvu2g1695 395 CDD UDP_G4E_1_SDR_e 50 379 IPR005886 GO:0003978|GO:0006012
Pvu2g1695 395 PRINTS Nucleotide sugar epimerase signature 77 93 - -
Pvu2g1695 395 PRINTS Nucleotide sugar epimerase signature 281 296 - -
Pvu2g1695 395 PRINTS Nucleotide sugar epimerase signature 307 322 - -
Pvu2g1695 395 PRINTS Nucleotide sugar epimerase signature 346 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1695 Pvu-Chr2 30634445 30639105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1695 50 364 Miscellaneous Gene Families AT4G00110 28.228 2.19e-22 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1695 K01784 - gmx:100818509 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1695 2 30634445 30639105 Pvu2g1695 2 30634445 30639105 ECH
Pvu2g1695 2 30634445 30639105 Pvu2g3072 2 46126946 46131610 PCT