Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3047 ATGGACGAAGAATTGGAGATTGGTGAGGGTGTGCAAGTGCAACATCAAAACAAAGATGCTGGCTACTCACTGAACCCTGAACTCCCCGAAATATTAAAACCCCAAGAATATGATGAAATTTCACAAGATAAGAATGTGGTTGAAGCAAGGGAACATTTGCATCCAGATCTATTTTCTGATGGTGGTGGTGTCACGGTTGAAGAATTAATGGTGAAAAGTTGCAATGGTTCTACCCTAGATATCGGTACTTTGAACAATCCAGGGTCTTTGCATAATAACCGCAGTCCATGGCGGCATATTTATCAGCCGTTTGCTGATTCGCGTGCGGGAAGGGACTGTGTTATAGCTAGAAAGAGTGTTCAAGCTACATCTAGTGCTTGGGAGGATTTTGGGTCCATGTCTTCCCGAGAGATATTAGCTAGAAAATCAGTCAATTATGATCATGGCAATGTCGTGCAGCACTTGTCCGCTGATGAGCATACAGCTGAACAAAAAGAGGATGAAGGTGATGCTCGCGAAGGAATGCAAACAAAAACTGTACACAAATCAGGATTTGCAGAGTATTTTCGTAGAAGTACATTGAAGGGAAAGGGTATTGTATGTAAAGGTCCATCTTCTAATGGTTTATATGTCGAGCCCAGAGATCAGAACCTGATGAAGTCTGGCATTGATATTCAGATGGATTCTAATGCATTTCTGAGCTCCGGTTTAAAGATTGCAGATTCTCCTTATAATGCTACAGTGCCAGGATTTGGTGGGTCTGACACTGATGGTGTGACTTTGAGAGAATGGTTGAAATCTAGGCACCACAAAGGAAGCAAAACAGAGCATTTAAGTATATTTAGAAAAATTGTAGACTTGGTTGGTGGTTCTCACTCTCAGGGAGTTGCAATGCAGAATCTGCACCCTTCTTATATTAAATTGCTACCATCCAACCATGTTATGTACCTTGGGTTGCCAACTCAGAAACAGAAATTAGACTGTGTTGTGAATTCTGAAGTTCTTCAGCTAGAGAATTCTCTTAATAGAAAAAGACTGTGGGAGAAGGTAAAATCTCCCTCTCTTAATTTGCGGATGAAGAAACAGAAATTCATTGATATTAAAGTCAATGCAGTGGCATCACAAGATTATTGCAATGAATACAAGGAAGATATCCAATTTTCTAATCATAATATTCAAAGAATATCTCGCATCCCTCACATATCTAATGCAGGTCAATTGCAATCGACTTCTTTAAATGAAAGATTGGAAGAAGAATGGTATACAAGTCCTGAGGGTGGTTGCACAATATTATCAAATATCTACTGTCTGGGAGTCCTTTTCTTTGAGTTATTTAATCATTTTGATTCAGAAAGAGCACATACTTCTGCAATGTCTGCTCTTCGTGGTAGGATTCTTCCTTCAGCTTTCCTATCAGAGTATCCTAAGGAAGCTGGATTTTGCCATTGGATGCTGCATCCTGAACCATCATCACGTCCAACAATAAGGGAGATCTTACAATCTGAAGTGATAAATGGAACACGAGAGGTGGACTGTGAAGAATTATTATCAAGTCTTAACCAATATGATGCAGAATCAGAATTGCTATTGCATTTCCTTATCTCACTGAAAGAGCAGAAACACGTGGATGCCCACAAATTGGCTGAAGAAATCAGATGCATGGAATCAGATATAGAAGAGGTGGAGAGGAGACATGATTTGAGACTATCCTTGTCTCCCACTAGCTTGGAGAACAACTCATCTTGTCGAATAGAGAATGTATCTCTTCTCAAAGAATCTAAAAGTGCAGAAATATTACCACCAGTATACACAATTTCTAAAGCAAATGAACTGAGACTGAAGAAAAATATGTGCCTACTTGAAAATGCTTACTTTTCTAAGAGATCTACAATTAAGCTTCCTGGAACAGAAACAGCAACCCGCCCAGATAAAGATGTACTGAGAAATTCTGACAATTTATGTGTAGCTCAAAAAGACATGGAAAAGCATACAGATACTTTAGGAGCTTTCTTTGACGGTTTGTGCAAGTATGCGCGTTATCACGATTTTGAAGTGCGGGGCATACTAAGAACTGCTGACTTTAAAAATCCTGTAAATGTAATATGTTCTCTGAGTTTTGATAGAGATGGAGAGTACTTTGCTGCTGCTGGGATATCAAAGAAAATAAAAATTTTCCAGTTCGATGCAATTTTCAATAACTCTGTCGACATCCATTATCCTGTAGTTGAGATGGTAAACAGATCAAGGCTCAGTTGTGTTTGCTGGAATAGCTACGTCCAGAACTATCTTGCCTCCACAGACTATGATGGTGTAGTTCAGCTATGGGATGCCAATACAGGTCAAGGGTTTTCACGATTCACCGAACATGAAAAGAGGGCCTGGTCTGTTGACTTCTCTCTGGTATGCCCTACTAAATTTGCCAGTGGGAGTGATGACTGTTCTTTGAAGCTGTGGAGCATCAATGAGAAAAACAGTTTAGGCACAATAAGGAATGTTGCTAATGTCTGTTGTGTTCAGTTTTCTGCTCATTCATCCCATATGCTGGCCTTTGGATCCGCGGATAATTCGGTTTATTGCTATGATCTTCGCTTTCTTAGAACCCCTTGGTGTGTGTTGGGTGGCCATCGTAAATCTGTAAGTTTTGTCAAATTCTTGGACGCTGAAACACTAGTTTCTGCATCAACCGATAACACCTTGAAGATCTGGGATCTCAACAAAACCTCTCCTGTGGGTCGATCAACTAGTGCTTGCAGCTTAACTCTGACAGGACATACTAATGAGAAGAATTTTGTGGGCTTATCAGTTGCTGATGGATATATAACATGTGGTTCAGAAACAAATGAGGTCTATGCCTACTATAAATCTTTTCCCATGCCAGTCATTTCACACAAGTTTGGGTCCATTGATCCTCTTTCTGGTAAAGAGATTGATGATAACAATGGTCAATTTGTTTCAAGTGTCTGCTGGAGAGGGAAATCGGACATGCTTATTGCAGCCAATACAAGTGGATCTATAAAAGTTCTACAGATGATTTGA 3036 0.3989 MDEELEIGEGVQVQHQNKDAGYSLNPELPEILKPQEYDEISQDKNVVEAREHLHPDLFSDGGGVTVEELMVKSCNGSTLDIGTLNNPGSLHNNRSPWRHIYQPFADSRAGRDCVIARKSVQATSSAWEDFGSMSSREILARKSVNYDHGNVVQHLSADEHTAEQKEDEGDAREGMQTKTVHKSGFAEYFRRSTLKGKGIVCKGPSSNGLYVEPRDQNLMKSGIDIQMDSNAFLSSGLKIADSPYNATVPGFGGSDTDGVTLREWLKSRHHKGSKTEHLSIFRKIVDLVGGSHSQGVAMQNLHPSYIKLLPSNHVMYLGLPTQKQKLDCVVNSEVLQLENSLNRKRLWEKVKSPSLNLRMKKQKFIDIKVNAVASQDYCNEYKEDIQFSNHNIQRISRIPHISNAGQLQSTSLNERLEEEWYTSPEGGCTILSNIYCLGVLFFELFNHFDSERAHTSAMSALRGRILPSAFLSEYPKEAGFCHWMLHPEPSSRPTIREILQSEVINGTREVDCEELLSSLNQYDAESELLLHFLISLKEQKHVDAHKLAEEIRCMESDIEEVERRHDLRLSLSPTSLENNSSCRIENVSLLKESKSAEILPPVYTISKANELRLKKNMCLLENAYFSKRSTIKLPGTETATRPDKDVLRNSDNLCVAQKDMEKHTDTLGAFFDGLCKYARYHDFEVRGILRTADFKNPVNVICSLSFDRDGEYFAAAGISKKIKIFQFDAIFNNSVDIHYPVVEMVNRSRLSCVCWNSYVQNYLASTDYDGVVQLWDANTGQGFSRFTEHEKRAWSVDFSLVCPTKFASGSDDCSLKLWSINEKNSLGTIRNVANVCCVQFSAHSSHMLAFGSADNSVYCYDLRFLRTPWCVLGGHRKSVSFVKFLDAETLVSASTDNTLKIWDLNKTSPVGRSTSACSLTLTGHTNEKNFVGLSVADGYITCGSETNEVYAYYKSFPMPVISHKFGSIDPLSGKEIDDNNGQFVSSVCWRGKSDMLIAANTSGSIKVLQMI* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3047 1011 Pfam WD domain, G-beta repeat 871 903 IPR001680 GO:0005515
Pvu2g3047 1011 SUPERFAMILY WD40 repeat-like 694 1008 IPR036322 GO:0005515
Pvu2g3047 1011 Coils Coil 544 564 - -
Pvu2g3047 1011 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 872 905 - -
Pvu2g3047 1011 SUPERFAMILY Protein kinase-like (PK-like) 258 513 IPR011009 -
Pvu2g3047 1011 ProSiteProfiles Trp-Asp (WD) repeats profile. 872 912 IPR001680 GO:0005515
Pvu2g3047 1011 PANTHER PROTEIN SPA1-RELATED 2 42 1011 - -
Pvu2g3047 1011 MobiDBLite consensus disorder prediction 157 177 - -
Pvu2g3047 1011 ProSitePatterns Trp-Asp (WD) repeats signature. 763 777 IPR019775 -
Pvu2g3047 1011 Gene3D Transferase(Phosphotransferase) domain 1 257 513 - -
Pvu2g3047 1011 ProSiteProfiles Trp-Asp (WD) repeats profile. 786 828 IPR001680 GO:0005515
Pvu2g3047 1011 Gene3D - 670 1011 IPR015943 GO:0005515
Pvu2g3047 1011 MobiDBLite consensus disorder prediction 1 26 - -
Pvu2g3047 1011 PANTHER PROTEIN SPA1-RELATED 2 42 1011 IPR044630 GO:0009640
Pvu2g3047 1011 SMART WD40_4 914 953 IPR001680 GO:0005515
Pvu2g3047 1011 SMART WD40_4 687 726 IPR001680 GO:0005515
Pvu2g3047 1011 SMART WD40_4 779 819 IPR001680 GO:0005515
Pvu2g3047 1011 SMART WD40_4 822 861 IPR001680 GO:0005515
Pvu2g3047 1011 SMART WD40_4 737 776 IPR001680 GO:0005515
Pvu2g3047 1011 SMART WD40_4 969 1009 IPR001680 GO:0005515
Pvu2g3047 1011 SMART WD40_4 865 903 IPR001680 GO:0005515
Pvu2g3047 1011 MobiDBLite consensus disorder prediction 158 177 - -
Pvu2g3047 1011 ProSitePatterns Trp-Asp (WD) repeats signature. 890 904 IPR019775 -
Pvu2g3047 1011 PRINTS G protein beta WD-40 repeat signature 763 777 IPR020472 -
Pvu2g3047 1011 PRINTS G protein beta WD-40 repeat signature 806 820 IPR020472 -
Pvu2g3047 1011 PRINTS G protein beta WD-40 repeat signature 890 904 IPR020472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3047 Pvu-Chr2 45943498 45949685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3047 806 952 Miscellaneous Gene Families AT5G08390 29.870 3.04e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3047 K16240 - gmx:100776980 1589.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1676 2 30453812 30463723 Pvu2g3047 2 45943498 45949685 PCT