Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1676 ATGGATGAAGAATTGGTCGATGAGGCAACACAATTGGAGGTTGCTGAGGATTCGCAGCGCCAGAACAAAGATTTACCTCACACGGAATGCCGAAAAATCTTGCAATCCCAAGAAGCCCGTATCCCTGTTAAGCAGGACTACTCGCACTTACCACCTCGGGAATATGATGATGTTCTACATGGTAAAAATGTAGTTGAAGGTATTGACCATGCAGATACATCACAGCATCCTGGTGTAAGCCTTTTTATGGATGATGGTGATGCTATGGTCGAAGAATTAACAGTAAAAAGTTACAATGGCTCAAGTTTGGATATTGGTACATCAAACAACCGAGGGCAAATGTTTAATCGGCTGAACCATTGGCAGAATTTTTATCAGGGAGCAAGTAATTCAGGAGTTGGAAATTCACTAAGTGATATTGGAACTAGAAACAGTGTTCAGGCCACATCCAGTGCTCGGGAGGATATTGGATCCTCATCTTTCCCAGAGATGCTGGCCAGAAAATCTCTCAGTGATGGCCAGAGCAATGTCATGGAGCACTTGGCAGCCGCTGAAAATAAAGAGGGTGCAGGTGATGTTCGTCAAGGAATACGGACAAAAATTATATCCCAATCAGGATTTGCAGAGTTTTTCATAAAAAATACACTGAAGGGTAAGGGTATTGTCTATAAAGGTCCGTCGTATGATGCCTTCTGTGTTCAGTCTAGAGAGCAAAACCGGATGAAGACTAACATTGCCACAGAACAGAATCAGATGAGAACCAGCATTGGCACACTGCAGAATCAGACGAGGACCAGCATTGGCACTGATCAGAATCAAACTAGGACCAGCATTGGCACAGATCAGAATCAGATGAAGATTGGCATTGGCACAGATCAGAATCAGATGAAGATTGGCATTGGCACAGATCAGAATCCGATGAAGATTAGCATTGGCACAGATCAGAATCAGATGAAGAATAACACTGGTACTGATCAGAAACAGATGAAGACTGGTATTGTTACTCACTTGAACTCTAATCAATCTGTGGGCTATGGTTCCAAAACTACAAATTTTTCTTCTCAATGTGGTGCTATGCCTAGATCTGGCAGGTCTGAATGTAATGGTGTGACTTTGAGAGAATGGCTGAAACATGGGCACCACAAAACTAGCAAAGTGGAAAGTTTGAATATATTTAGGAAGATTGTGGATTTGGTGGACAACTCTCACTCTCAGGGAGTTGCATTGCATAACCTGTGTCCATCTTATATTAAATTGTCACCATCAAACCAAGTCATGTACCTTGGTTTACCTGTTCAAAAACGAATGGTGGATGGTGTTGTAAATTCTGAAGTTGTCCACGTAGATAGTTCTGTTGTTAGAAAAAGACTGTCAGAGCAAGTAACATATCCCTCTCATGATTTAGGGTCAAAGAAGCAACGGCTTAATGAGAATTTGAGAGTTACCGGTGGTGACTTGGGTCTTGAAACTGCAAGTGATAGGAAACTTCATAGCGGACCACAAGATTTTTACAATGAATATGAGGAAGATCCCCAATTTTCTAAATATAACATTGGAAGAATGTCTAGCATCCCTCATGTATCTAATGCAGGTCAAATTCCATTGACATCATGTGAAAAATTTGAAAATAAATGGTACACAAGTCCTGAGGGAGGTTACACAACATCATCAAATATCTACTGTCTTGGTGTCCTCCTTTTTGAGTTACTTGGTCATTTTGACTCTGAAAGAACACATATTGCAGCAATGTCTGATCTTCGACATAGGATTCTTCCTCCAATTTTCCTATCAGAAAACCCTAAGGAAGCTGGCTTTTGTCTTTGGCTGCTCCATCCAGAATCGTCCTCACGTCCAACAACAAGGGAAATCCTTCAGTCTGAATTGATTAATGGATTGCAAGAGTTTTTTAGTGAGGAACTTTCATCAAGTATTGACCAAGAAGATGCAGAATCAGAATTGTTATTGCATTTCCTTGTTTTGTTAAAAGAGCAGAAGCAGAACAGTGCTTTCAAATTGGCAGAAGAAATCAAGTGCTTGGAATCAGATATAGGAGAGGTGGACAGGAGACACGACTCAAGAAATTCCTTGGTGTCCTCTGGCTTGCAGAATGACTACTCTTCTCAGAAAGAGATTATGCCTCTTAAGAAGGACTCTTTAAGTTTAGAAATGCTGCCCTCAATATCCCCCATCTCTAAGTCAAATGAAGTGAGATTGATGAGAAATATATGCCATCTTGAAAGTGCTTATTTTTCCATGAGATCCAAACTTCAGCTTTCTGAAACAGATGCCTCAAGTCACCCTGATAAAGATGTACTAAGAAATCGTGAGAACTGGCACGTGGCCCAAAAAAGTGAGGAACAACCTAAAAGGAAAGATACTTTAGGGACATTCTTTGATGGTTTGTGCAAGTATGCACGTTATTGCAAGTTTGAAGTGCTGGGTGTACTAAGAAATGCTGATTTTAACAATCCTGCAAATGTCATTTGCTCTTTAAGCTTTGATCGGGATGCAGATTACTTTGCCTCAGCTGGGATATCTAAGAAAATAAAAATATTTGAGTTTAGTGCACTTTGCAATGACTCTGTTGATATCCATTACCCCGTGGTTGAGATGTCAAACAGATCAAAACTCAGCTGTGTTTGCTGGAATAACTATATTAAAAACTATCTTGCGTCTACAGATTATGATGGTATAGTCAAGTTATGGGATGCAAGTACAGGCCAAGAATTTTCTCAATTCACTGAACACGAGAAGAGGGCTTGGTCTGTTGACTTCTCTGTTGTATGCCCTACGAAGTTTGCCAGTGGAAGTGATGATTGTACTGTCAAGCTGTGGAGCATCAGTGAGAGGAACTGTTTAGGCACAATCAGGAATGTTGCTAATGTCTGCTGTGTTCAATTCTCTTCTCATTCCTCCCATTTACTGGCCTTTGGATCTGCGGATTACTCAACATATTGCTATGATCTTCGCAATCTTAGAAGTCCCTGGTGTGTATTGGCTGGCCATCGTAAGGCCGTTAGCTATGTCAAATTCTTGGACTCTGAAACACTTGTTTCTGCTTCTACTGACAATACATTGAAGATCTGGGATCTCAATAAAACCTCTCCTGTGGGTGCATCCATTAATGCTTGCAGCCTAACCCTGTCAGGACACACCAACGAAAAGAATTTTGTGGGTCTGTCAGTGGCTGATGGATATATAGCGTGTGGTTCAGAAACAAATGAGGTTTATTCCTACTATAGATCGCTTCCCATGCCAATCACTTCGCACAAATTTGGGTCCATTGATCCCATTTCTGGTAAAGACACAGAGGATGACAATGGACAGTTTGTTTCAAGTGTGTGCTGGAGAGGGAAATCCGACATGCTTATTGCAGCCAATTCAAGTGGATGTGTGAAAGTGTTGCAGATGGTTTAA 3417 0.4106 MDEELVDEATQLEVAEDSQRQNKDLPHTECRKILQSQEARIPVKQDYSHLPPREYDDVLHGKNVVEGIDHADTSQHPGVSLFMDDGDAMVEELTVKSYNGSSLDIGTSNNRGQMFNRLNHWQNFYQGASNSGVGNSLSDIGTRNSVQATSSAREDIGSSSFPEMLARKSLSDGQSNVMEHLAAAENKEGAGDVRQGIRTKIISQSGFAEFFIKNTLKGKGIVYKGPSYDAFCVQSREQNRMKTNIATEQNQMRTSIGTLQNQTRTSIGTDQNQTRTSIGTDQNQMKIGIGTDQNQMKIGIGTDQNPMKISIGTDQNQMKNNTGTDQKQMKTGIVTHLNSNQSVGYGSKTTNFSSQCGAMPRSGRSECNGVTLREWLKHGHHKTSKVESLNIFRKIVDLVDNSHSQGVALHNLCPSYIKLSPSNQVMYLGLPVQKRMVDGVVNSEVVHVDSSVVRKRLSEQVTYPSHDLGSKKQRLNENLRVTGGDLGLETASDRKLHSGPQDFYNEYEEDPQFSKYNIGRMSSIPHVSNAGQIPLTSCEKFENKWYTSPEGGYTTSSNIYCLGVLLFELLGHFDSERTHIAAMSDLRHRILPPIFLSENPKEAGFCLWLLHPESSSRPTTREILQSELINGLQEFFSEELSSSIDQEDAESELLLHFLVLLKEQKQNSAFKLAEEIKCLESDIGEVDRRHDSRNSLVSSGLQNDYSSQKEIMPLKKDSLSLEMLPSISPISKSNEVRLMRNICHLESAYFSMRSKLQLSETDASSHPDKDVLRNRENWHVAQKSEEQPKRKDTLGTFFDGLCKYARYCKFEVLGVLRNADFNNPANVICSLSFDRDADYFASAGISKKIKIFEFSALCNDSVDIHYPVVEMSNRSKLSCVCWNNYIKNYLASTDYDGIVKLWDASTGQEFSQFTEHEKRAWSVDFSVVCPTKFASGSDDCTVKLWSISERNCLGTIRNVANVCCVQFSSHSSHLLAFGSADYSTYCYDLRNLRSPWCVLAGHRKAVSYVKFLDSETLVSASTDNTLKIWDLNKTSPVGASINACSLTLSGHTNEKNFVGLSVADGYIACGSETNEVYSYYRSLPMPITSHKFGSIDPISGKDTEDDNGQFVSSVCWRGKSDMLIAANSSGCVKVLQMV* 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1676 1138 Gene3D Transferase(Phosphotransferase) domain 1 367 636 - -
Pvu2g1676 1138 ProSiteProfiles Trp-Asp (WD) repeats profile. 999 1039 IPR001680 GO:0005515
Pvu2g1676 1138 ProSiteProfiles Trp-Asp (WD) repeats profile. 913 955 IPR001680 GO:0005515
Pvu2g1676 1138 SUPERFAMILY Protein kinase-like (PK-like) 367 635 IPR011009 -
Pvu2g1676 1138 ProSitePatterns Trp-Asp (WD) repeats signature. 1017 1031 IPR019775 -
Pvu2g1676 1138 SUPERFAMILY WD40 repeat-like 822 1135 IPR036322 GO:0005515
Pvu2g1676 1138 PANTHER PROTEIN SPA1-RELATED 2 1 261 - -
Pvu2g1676 1138 PANTHER PROTEIN SPA1-RELATED 2 243 1138 - -
Pvu2g1676 1138 SMART WD40_4 1041 1080 IPR001680 GO:0005515
Pvu2g1676 1138 SMART WD40_4 864 903 IPR001680 GO:0005515
Pvu2g1676 1138 SMART WD40_4 809 853 IPR001680 GO:0005515
Pvu2g1676 1138 SMART WD40_4 1088 1136 IPR001680 GO:0005515
Pvu2g1676 1138 SMART WD40_4 906 946 IPR001680 GO:0005515
Pvu2g1676 1138 SMART WD40_4 949 988 IPR001680 GO:0005515
Pvu2g1676 1138 SMART WD40_4 992 1030 IPR001680 GO:0005515
Pvu2g1676 1138 MobiDBLite consensus disorder prediction 1 26 - -
Pvu2g1676 1138 ProSiteProfiles Trp-Asp (WD) repeats profile. 870 912 IPR001680 GO:0005515
Pvu2g1676 1138 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 999 1032 - -
Pvu2g1676 1138 Pfam WD domain, G-beta repeat 998 1030 IPR001680 GO:0005515
Pvu2g1676 1138 Pfam WD domain, G-beta repeat 908 946 IPR001680 GO:0005515
Pvu2g1676 1138 Gene3D - 797 1138 IPR015943 GO:0005515
Pvu2g1676 1138 PANTHER PROTEIN SPA1-RELATED 2 1 261 IPR044630 GO:0009640
Pvu2g1676 1138 PANTHER PROTEIN SPA1-RELATED 2 243 1138 IPR044630 GO:0009640
Pvu2g1676 1138 ProSitePatterns Trp-Asp (WD) repeats signature. 890 904 IPR019775 -
Pvu2g1676 1138 PRINTS G protein beta WD-40 repeat signature 890 904 IPR020472 -
Pvu2g1676 1138 PRINTS G protein beta WD-40 repeat signature 933 947 IPR020472 -
Pvu2g1676 1138 PRINTS G protein beta WD-40 repeat signature 1017 1031 IPR020472 -
Pvu2g1676 1138 Coils Coil 662 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1676 Pvu-Chr2 30453812 30463723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1676 933 1076 Miscellaneous Gene Families AT5G08390 29.452 7.99e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1676 K16240 - gmx:100784300 2006.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1676 2 30453812 30463723 Pvu2g1676 2 30453812 30463723 ECH
Pvu2g1676 2 30453812 30463723 Pvu2g3047 2 45943498 45949685 PCT