Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2956 ATGGCGTTGCAGGAGAGGTTGGACAAGTTCAAGAAGCAGCAAGAAAAGTGCCAAACGACACTGTCAAGCATTGCAGCAAGCAAGGCCGCAGCAAGCCAAAAATCTGCCGCGCATGGCTCGGCCAATGGAAGAAACGCGCCCCCTGCGGTTAAGTTTTCGAACGACACGGAGAGGCTTCAGCATATTAACAGCATACGTAAAGCCCCTGTGGGTGCTCAGATGAAGCGTGTTATTGATCTCCTTCTGGAGACGAGACAAGCTTTAACACCGGAGCAAATAAACCAGGCATGCTATGTTGACATAAAGGCTAACAAAGATGTCTTTGAGAATCTTAGGAAAAACCCAAAAGTGAATTATGACGGCCTACGATTCTCTTACAAGTCAAAGTATGGTCTTAAGGACAAAACAGAACTTCTTCAACTGATACGCAAGTATCCTGAGGGCCTTGCGGTTATTGACTTAAAAGATGCTTACCCCACTGTGATGGAAGACTTGCAGGCTTTGAAAGCTGCAGGGCAGATTTGGCTGCTGTCCAACTTTGATTCACAGGAAGACATTGCCTACCCTAACGACCCCAAATTGCACATTAAGGTTGATGATGATCTAAAACAGCTTTTCCGGGGTATTGAATTGCCTCGTGATATGATTGATATAGAGAAGGATCTTCAAAAGAATGGAATGAAGCCCGCCACCAACACTGCAAAGAGGAGGAGTGCAGCACAAATTCAAGGCATTTCTTCCAAGCCCAAGCCTAAGAAAAAGAAGAGTGAAATCAACAAGAGAACGAAGCTGACCAATGCCCATCTTCCAGAGCTTTTTCAAAACTTGAACAATTCCTGA 840 0.4524 MALQERLDKFKKQQEKCQTTLSSIAASKAAASQKSAAHGSANGRNAPPAVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLLETRQALTPEQINQACYVDIKANKDVFENLRKNPKVNYDGLRFSYKSKYGLKDKTELLQLIRKYPEGLAVIDLKDAYPTVMEDLQALKAAGQIWLLSNFDSQEDIAYPNDPKLHIKVDDDLKQLFRGIELPRDMIDIEKDLQKNGMKPATNTAKRRSAAQIQGISSKPKPKKKKSEINKRTKLTNAHLPELFQNLNNS* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2956 279 Pfam TFA2 Winged helix domain 2 133 190 IPR040501 -
Pvu2g2956 279 MobiDBLite consensus disorder prediction 226 245 - -
Pvu2g2956 279 MobiDBLite consensus disorder prediction 28 55 - -
Pvu2g2956 279 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 278 IPR016656 GO:0005673|GO:0006367
Pvu2g2956 279 MobiDBLite consensus disorder prediction 223 279 - -
Pvu2g2956 279 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 58 133 IPR003166 GO:0006367
Pvu2g2956 279 PANTHER BNAA02G21830D PROTEIN 1 278 - -
Pvu2g2956 279 Pfam TFIIE beta subunit core domain 72 130 IPR003166 GO:0006367
Pvu2g2956 279 PIRSF TFIIE-beta 1 278 IPR016656 GO:0005673|GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2956 Pvu-Chr2 45083083 45086055 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2956 K03137 - gmx:100802433 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2956 2 45083083 45086055 Pvu2g2956 2 45083083 45086055 ECH
Pvu2g1603 2 29732146 29736664 Pvu2g2956 2 45083083 45086055 PCT