Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1603 ATGGCGTTTCAGGAGAAGGCAAACAGGTTTAAAAGGCAGCCAGAGAAGAATTCCTCTGCTTCAAACAATGGAAGAACTCCAGGTGCTGTCAAATTCTCTACCGACACGGAAAGACTTCAACATGTTAATAGCATACGCAAAGCCCCCGTAGGGGCTCAGATGAAGCGTGTTATTGATCTCCTTTTTGAGACCCGAAAGGCTTTAACGATGGAGCAAATAAATGAAGCGTGTTACGTGGACATGAGAGCTAATAAAGATGTTTTTGAGAGTATGAGGAAAAACCCAAAAATAAAATATGATGGGGAAAAATTCTCTTACAAGTCCAAGCATGATGTTAGGGACAAAAGTCAGCTGCTTTTCCTGGTACGTAAGTTTCCAGAGGGCATTGCTGTTGTTGACCTAAAAGATTCTTACCCAACTGTGATGGAAGACTTGCAGGCTTTGAAAGCTTCAAGGGAGGTTTGGCTGTTATCTAACTTTGACTCGCAAGAGGACATTGCCTACCCGAATGATCCTAAAGTGCCCATGAAGGTGGATGATGACCTAAAACAGCTTTTCCGGGGGATTGAATTGCCTCGTGATATGATTGACATAGAGAGGGATCTACAAAAGAATGGAATGAAGCCTGCTACTAACACTGCAAAGAGGAGGAGTGCAGCGCAAATGGAAGGCATTTCAACAAAGCCTAAACCTAAGAAGAAGAATGAAATCACTAAGAGGACCAAGCTGACTAATGCCCATCTTCCGGAGCTTTTTCAGAATTTAAATAATTCCTGA 777 0.426 MAFQEKANRFKRQPEKNSSASNNGRTPGAVKFSTDTERLQHVNSIRKAPVGAQMKRVIDLLFETRKALTMEQINEACYVDMRANKDVFESMRKNPKIKYDGEKFSYKSKHDVRDKSQLLFLVRKFPEGIAVVDLKDSYPTVMEDLQALKASREVWLLSNFDSQEDIAYPNDPKVPMKVDDDLKQLFRGIELPRDMIDIERDLQKNGMKPATNTAKRRSAAQMEGISTKPKPKKKNEITKRTKLTNAHLPELFQNLNNS* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1603 258 MobiDBLite consensus disorder prediction 208 258 - -
Pvu2g1603 258 MobiDBLite consensus disorder prediction 227 243 - -
Pvu2g1603 258 MobiDBLite consensus disorder prediction 1 30 - -
Pvu2g1603 258 Pfam TFIIE beta subunit core domain 52 112 IPR003166 GO:0006367
Pvu2g1603 258 MobiDBLite consensus disorder prediction 14 30 - -
Pvu2g1603 258 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 17 257 IPR016656 GO:0005673|GO:0006367
Pvu2g1603 258 PANTHER BNAA02G21830D PROTEIN 17 257 - -
Pvu2g1603 258 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 38 113 IPR003166 GO:0006367
Pvu2g1603 258 Pfam TFA2 Winged helix domain 2 113 170 IPR040501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1603 Pvu-Chr2 29732146 29736664 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1603 K03137 - gmx:100788089 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1603 2 29732146 29736664 Pvu2g2956 2 45083083 45086055 PCT