Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2955 ATGGGAAGTCCTGATATTGAAAAGTCTGAAGAAACCAATACACAGATTGACAGTAACACAAATTCTAATTCCAAACAGCAGAGTGTAGAAAAAGCTGACGAACATCCTGAATGGTTACCTGATGGCTGGAACATGGAAGTCAGAATCCGTAAAAGTGGTTTACACATGGGATCAGGATACAAGTGTTACATCGAACCATTGAAAGGATACAAATTCTTCTCCAAACCAGAGGTATTACGATATCTCGAAACAGTAAAGGACAGCAGTTGCACTTCCAAGAAGGGGAAGAAATGTAGTAAGATAAATACTCCAAATGACAAGAGTTGCACTTCCAAGGAGAAGAAATGCAGTAAAATGCAGACTCCAAACAACAAGAGCTGCAGTTCCAAGAAGGAGAAAAAAAGCACTAGCATGGAGTTTCCAAATGACAACAGTGACACTCCCAAGGAGGAGGAGAAGTACAGTAACATGGATTTTCCAAACAACAGTTGCGCTCCCAAGAAGGAGAAGGATGGGAGTAACTTGGATTCTTCCATCGAAAACAGTTGCACATCCAAGAAGGAGAAGATAGGCACTAACATGGATTCCGCAAAGGACAGCAGTTGCGCTCCAAAGAAGGAGAAGAATTGCAGTAACATGGATTCTCCAATTGATATTGTGATTGAGAAGTCTATTGCGGAGGATTTACCACCTGGGTGGGTAAAAGAATTAAAGATTACAAAGAACAGCAAGGGCATTCGGAAAGATCCGTTTTATATTGATCCAGTGAGTGGATATGTATTCCGCTCTAAGAAGGATGTACTGCGGTATCTTGAATCTGGTGATGTTCGGTCATGTGCCTTTAAGCCAAGTAGAAGACAAATCCAAGATGAAGACAACATAACTCCACCACCTGCTGCCAAGAGACGGAAGCTGAAGCAGGCTGCAACGAAGGTTGCTTCTGTTCCCATAGGTGATTCTGTTGTAAAGATGCATTCACTAGACGATGGAGCTGCAAACTCATCTGAATTGAAGAAAACATCTGACCCAGGTAGCTCAGCACTTTTGAAAAATGAATCCTTGAAGGAATCAGCAAAAGCACTTTCTGCAGATGATGTGCAAGAGAAGGAGGTTGCTGTGAATACAATGGAGAATGGTAATGAGAATCACAGTAACCATAGCATATCCAAAATCAGGAAGGAGTTCAATGTACGTCAGCGATCATCACCGAGACTTGCTGGAAGTAAATCCGTACAGTTGGTTAACAATGTGATGAATGAACAGACTCCTCAGGTTCCAAAAAGAAACTTGAGGAACAGTAGAAACACTCTAGATGTTGATATTTCTGTGGACCAAGCAGCTCCTAAAGAACAACCACATGAGCAAGAAACAGATAAAATAGAAGACAATAAGCCAGAAATTCAAATCAGATCAAATAAATCAGGTAAAAAGAAAGAGCACCACCTTCCTCGTCGTGCTTCAAAACGATTAGCTGCTATTGAGCATGAGTCAATGAACTCCAAAGTGGAATTGCAGCAAAATCAGTCTGGTCCAATAAATGGAAAGTCAGCAAATAAAAGAGGAAAGTCTGAACCTCGTCTGGAGAAATGTGGAAAAGAGATGGATGATGAGAGAACAGAACCTCGGCTGTCCTTTGCATATCACTATTCATGGTCTGACCCAAGCTTGGAATATGCAATCAATGCCCTCACTGGTGTGTTACCACCAGCTGATAATATAACCAGTAGTGCCGTTGCTGAAACTGATATTAAAAAAACTTTGTTTAACAATATTCCAGGAAGAAGTGCCACTACAATCCCTGGAACTGATGCTCAAAACACTTCAGTTGGTAATGTTACGGGAAGTAGCACCACTGCAGTCCTTGAAACTGATATTCAAAAAGTGTCAGTTGAGAATGGTACGGGAAGGAGCACTACTGCAGTTCCTGAAACTGATATTCAAAAGGCTTCAGTTGAGAATGGTACGGGAAGGAGCACTACCGCAGTTCCTGAAACTGATATTCAAAAGGCTTCAGTTGACATTGCTACGGGAAGAAGCACCGCTGCAGTCCCTGAAACTGATATTCCAAACACTTCAGTTGACATGGGCAGAAGTGCCACTTCAGTTGACATGGGCAGAAGTGCCACTTCAGTTCCTGAAACTGATCTTCAAAAAACTTTGATTGACAATGTTAAGGGAAGTAGCGCCACTACAATCCCTGAAAATGATGTTCAAAAAACTCTGGTTGAAAACGAATCCGGAAAAAACACTTCTACAGGCCCTGAAACCGATATTAAAAAATCTTTGATTGACAGTGTTACAGGAAGCAGGGACAGTGAAAATAATTTACTTGACACTGTTATGGGTAGCAGGGACAGTGATAACAATTTACTTGACACTGTTACAGGAAGCAGGGACAGTGAAAACAATTTACATGACACTGTTACAGGAAGCAGGGATAGAAAATCCCAGGTACGTTCTAATAAACCCAAGAGAAAGAAAGAGCTCAAAGTACCTGTGCGATTATCAAAGCGACTTGCTGGCCTTCAACCTGAGTTACCGCCTGCTGAAAGAGCTCTTGAATATTCCACTAGAAAATCATGCAAAGAAGAGCCAAGTGTCACTGCTACTTTAACTAATGGAGTGTCTGATTATCACAATGCCGGGGAAGAAACCAAGCTTACACTTATTCAAGTTTCTGATAGTTTGAAAACAGAAGTAGTTGGAGAACCATTAAAACGGAGTGAGAAGTCACATGATGCCCAAACCGATCACAAGGAACAATTGGAGAAAGTTGAAGCTGAAAATGTTGGTGATGTGAGATCAGAGCCACAGCTCCCCTTACCGTTTGGGGACTCTTGGTCAGATCCATGCCTAGAATTTGCTATCAAGACACTCACTGGTGCTTTTCCAGTTGATGCTGGTGGAGACATTATGCCTGCTTTGCCTCCTGGCTTTGATAATCCGCCATATAAGCAAGTGCATCGAAGTGTGGTGACAGACATCAATCAAGAAGTTCATGATAACTCGAACCAATCCTCTCACAATAAGGAGCTTAATATGGTTAGTCAACCTGAGTTGAGGACCGGCTCCACCTCTTATGAAAATGCTCCTAAGTTTACAACTAGAGATTTTGATCAATACAACATACTTAAGAATTTGGATGGGGAACCTAGTCTCACTGGAAACATAACACAACATGTGCATCATTCTACGAATATAAACACACTAGCACATGAGCCATTAAAGCAAAATGGACAGGCAGTTGAGGGTGAAACTGTCACAACGGAGCAACAACTAATTGAAACTGGAGCTGTAAACCACGATAATTCGGAGTTACAGTATTGTGCACCGTTTATGAATTCTTGGTCGGACCCATGCCTAGAATTTGCATTTAAGACTCTTACAGGTGTGATACCAGTAGAGGAAAATTTAACACTCCAAGGATGTTTCCCGGAACCGGCTAACTATCATGAACGGAGGGATGGTGTCTCATTGTTGCCAGATTTCAGATCTTCCAGCTTTTCACAAAGCGATTTCTCCTTTCTCCATGATACAGGGTCTAAGTCCATGCCGGGGCAGCAGTCATCAGTAAGCTCTTCATTCCTACCCTTGGAAAAAACAAGCATTCAAGGTTTCGCTGGAGTTGATCCTCAAACACACTTTTCTCAGTGCAACAATAATTTTCAAAGAAGGTAA 3678 0.4182 MGSPDIEKSEETNTQIDSNTNSNSKQQSVEKADEHPEWLPDGWNMEVRIRKSGLHMGSGYKCYIEPLKGYKFFSKPEVLRYLETVKDSSCTSKKGKKCSKINTPNDKSCTSKEKKCSKMQTPNNKSCSSKKEKKSTSMEFPNDNSDTPKEEEKYSNMDFPNNSCAPKKEKDGSNLDSSIENSCTSKKEKIGTNMDSAKDSSCAPKKEKNCSNMDSPIDIVIEKSIAEDLPPGWVKELKITKNSKGIRKDPFYIDPVSGYVFRSKKDVLRYLESGDVRSCAFKPSRRQIQDEDNITPPPAAKRRKLKQAATKVASVPIGDSVVKMHSLDDGAANSSELKKTSDPGSSALLKNESLKESAKALSADDVQEKEVAVNTMENGNENHSNHSISKIRKEFNVRQRSSPRLAGSKSVQLVNNVMNEQTPQVPKRNLRNSRNTLDVDISVDQAAPKEQPHEQETDKIEDNKPEIQIRSNKSGKKKEHHLPRRASKRLAAIEHESMNSKVELQQNQSGPINGKSANKRGKSEPRLEKCGKEMDDERTEPRLSFAYHYSWSDPSLEYAINALTGVLPPADNITSSAVAETDIKKTLFNNIPGRSATTIPGTDAQNTSVGNVTGSSTTAVLETDIQKVSVENGTGRSTTAVPETDIQKASVENGTGRSTTAVPETDIQKASVDIATGRSTAAVPETDIPNTSVDMGRSATSVDMGRSATSVPETDLQKTLIDNVKGSSATTIPENDVQKTLVENESGKNTSTGPETDIKKSLIDSVTGSRDSENNLLDTVMGSRDSDNNLLDTVTGSRDSENNLHDTVTGSRDRKSQVRSNKPKRKKELKVPVRLSKRLAGLQPELPPAERALEYSTRKSCKEEPSVTATLTNGVSDYHNAGEETKLTLIQVSDSLKTEVVGEPLKRSEKSHDAQTDHKEQLEKVEAENVGDVRSEPQLPLPFGDSWSDPCLEFAIKTLTGAFPVDAGGDIMPALPPGFDNPPYKQVHRSVVTDINQEVHDNSNQSSHNKELNMVSQPELRTGSTSYENAPKFTTRDFDQYNILKNLDGEPSLTGNITQHVHHSTNINTLAHEPLKQNGQAVEGETVTTEQQLIETGAVNHDNSELQYCAPFMNSWSDPCLEFAFKTLTGVIPVEENLTLQGCFPEPANYHERRDGVSLLPDFRSSSFSQSDFSFLHDTGSKSMPGQQSSVSSSFLPLEKTSIQGFAGVDPQTHFSQCNNNFQRR* 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2955 1225 MobiDBLite consensus disorder prediction 1 40 - -
Pvu2g2955 1225 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 219 286 IPR001739 GO:0003677
Pvu2g2955 1225 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 29 108 IPR001739 GO:0003677
Pvu2g2955 1225 Pfam Methyl-CpG binding domain 35 96 IPR001739 GO:0003677
Pvu2g2955 1225 Pfam Methyl-CpG binding domain 226 275 IPR001739 GO:0003677
Pvu2g2955 1225 MobiDBLite consensus disorder prediction 519 536 - -
Pvu2g2955 1225 MobiDBLite consensus disorder prediction 727 804 - -
Pvu2g2955 1225 Gene3D - 5 138 - -
Pvu2g2955 1225 Gene3D - 185 315 - -
Pvu2g2955 1225 SUPERFAMILY DNA-binding domain 22 91 IPR016177 GO:0003677
Pvu2g2955 1225 PANTHER OS04G0193200 PROTEIN 669 1217 - -
Pvu2g2955 1225 PANTHER OS04G0193200 PROTEIN 4 576 - -
Pvu2g2955 1225 MobiDBLite consensus disorder prediction 684 714 - -
Pvu2g2955 1225 CDD MBD 229 273 - -
Pvu2g2955 1225 MobiDBLite consensus disorder prediction 500 516 - -
Pvu2g2955 1225 MobiDBLite consensus disorder prediction 127 156 - -
Pvu2g2955 1225 PANTHER OS04G0193200 PROTEIN 4 576 IPR038945 -
Pvu2g2955 1225 PANTHER OS04G0193200 PROTEIN 669 1217 IPR038945 -
Pvu2g2955 1225 MobiDBLite consensus disorder prediction 1 27 - -
Pvu2g2955 1225 MobiDBLite consensus disorder prediction 500 536 - -
Pvu2g2955 1225 MobiDBLite consensus disorder prediction 447 473 - -
Pvu2g2955 1225 MobiDBLite consensus disorder prediction 902 921 - -
Pvu2g2955 1225 SUPERFAMILY DNA-binding domain 227 276 IPR016177 GO:0003677
Pvu2g2955 1225 MobiDBLite consensus disorder prediction 441 485 - -
Pvu2g2955 1225 MobiDBLite consensus disorder prediction 176 199 - -
Pvu2g2955 1225 MobiDBLite consensus disorder prediction 90 210 - -
Pvu2g2955 1225 MobiDBLite consensus disorder prediction 727 830 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2955 Pvu-Chr2 45073381 45080275 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2955 - - pvu:PHAVU_002G287000g 2406.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2955 2 45073381 45080275 Pvu2g2955 2 45073381 45080275 ECH
Pvu2g1602 2 29718163 29729526 Pvu2g2955 2 45073381 45080275 PCT