Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1602 ATGGGTAAAGCCCAAGATAAAATGGCTGAAGCAACCAATAGACAGATTATCAATAGCACAAAATGCAAGACTGCAGAGAAATCAAATGAACATCCTGAATGGTTACCTGATGGTTGGATTGTGGAATCCAAAACTCGAAAAAGTGGTGCAAATATGGGATGTGGGTATAAGTGTTACATTGATCCAACTGGATGCAAATTCTACTCCAAACCTGAGGTGTTACGATATCTTGAGACTGTAAACAGCAACAGTCACAGTTCCAAGAAGGAAAAGATGCGCAAAAGCAATGACGCAGTTGAGAAGTCCACTGCTGAGGATTTACCACCTGATCAGATAGCAGATGTCAAAATGAAGAAGAGTAGTAATGGCTATAGAATAGATCCGGATACGGTCGAGAAGTCCCCAGTTGAGGATTTACCACCTGGGTGGACAATAGAAGCCAAGGTTAGGAAGGGTGGTACTGGCAATAGGAAAGATCTGTTTTATATAGATCCGGTGAGTGGATATGTCTTTCGCTCCAAGAAGGATGCACTGCGCTATGTTAAGTCTGGTGATATAAGTGCGTGTGCGATTAAACCATTTAAACGACAAAACCAAGATGAAGACAAAGTATCTGATTCGGACAAGAAGTCCCAAGTTGAGGATTTACCACCTGGGTGGATAACAGAAGCCAAGGTTAGGAAGGGTGGTACTGGCAAGAAGAAAGATCTGCAATCATCTACTGGCAAAAAACAGAAACTAAAGCAGTCTGCAACAAATCGCCGCCATTCTGTAGATGATGTGCTAGAGAAGAACCACGTTGTGAATATGATGGAGCATGCTAGTGAAAAGAATCACAGCAACCGTAGTTTATCCAAAACTAAGGAGTCCAATGTGGCTCGCCGTTTTTCACGGAGACTTTCTGGGGTTGAACATGACCAGTTGACCTGTGTGGCCAATGAACAGGCTCTTCAAGTTCCTAAAAGAGATTTCGGAAAAAAGATAAGTATTTTAGACACTGATTTGACAAATAAATCATCTCAGCTGCCGAGTGGTGTCCTGGAAATTGGGCGTGAAGAGCAAGGAAAGGTGCTGTTGAACTCAAACAAATCTGGAACCAAGAAAGAAAAACAAATTTTTTGTCGTGCTTCAAAACGATTAGCTGGACTTCAACCCAAGCTGATGAGCAACTCCATTTCCCACAAAAAAGCTTATAAAAGTAAAAAGTCCAAAGGTGAGGTCAAAGCAACCTTGCAGCAAAGTGATGGTCAGCCAGTTATGGAGCTTGCAGATCATGCAACAATAAATGGAGAGTCGTCAAATAAAGGCAGAAAACTTCCCGAAGCCACACCCATAACTAGCAATCAACTGAAGAAATTTGACGACAAAGAAATAAATAAAGATGAGAAATCAGAACTTGCGCAATCCTTTGCATTTCATTATTCTTGGTCTGACCCATGCTTGGAATTTGCAATTCAGACCCTCACAGGTACATTACCGGTTGAAGATTCAACTGACAATGGTAATGCCAGGGTTTCTGAAACTAATACATCTCCCAAAAATAGGTTGGTTGAGAATGTTACAGGAAACAGCAGTGACAAAACCTCACGTGTAAATTCAAAGAAATCCAAGAACAAAAAGGAGCCTACAGTGCCAAGGCAGTTGTCAAAGCGACTTGCTGGCAATGAACCTGAGGTACTTCCTACTGAAAAAGCTGTTGAATACGCCGCCCCTCAAAAGTCGTGCAATGACAATGTAGCTGCTACTGCGAGTTTAACTAATGGAGTGTCTGGGCATCCTTATGACAGGGAAGAATCCAAACTTGTTGTCCAGGCATCTGACAGGTTGTGTCGTGAATCATTGAGCAAGATTGAGAAGTCATATGATACCAAAACGGTTCCCAATGAACAATTGCGGAGGCATGAAGATGAAAATGTCGATGATGAAAGATCATATTCACAGTTCCCCACACCTTTTGGGGACTCCTGGTCAGATCCTTGCTTAGAATTTGCAATTAAGACTCTTTCTGGTGCTTTGCCAGTTGATGCACCAGCTGCGGACATTTTACCTGCTGTGACTCCTGATGTTAGTGAGACCCCAAATAAGGAGACACTTCAGAGTATGGAGCAGAAGAGAATCGATGCTGAAACTCGTGATGATCCCTACCAGTCCCAGACCAAGATAGAGTTTAATACTGTTTGCCACACATCAAAACAAGTCCAGAACCAGCCCGAGGTGACGACCTACTCCACATCTTGTGGAACTGATCCAAAGTTTGCAACTGGAGAGTCTTACAAGGATGGAGACAGTGTAGCCAGGAATTCTAATGGAAGAGAGCCCCAACGTATTAAATCTGGGAACCCAATAGAAATTGATATAAACAAAACAATTCTCGAAGAAGAACCACAACCCGAAACAATAAACTACGATAATTCTGAAAGAGAATTCGGTGCTTCATTTATGGATTCTTGGTCAGATCCATGCCTAGAATTTGCATTTAATACTCTTTCAGGCACAATACCAGGAGAGGAAAATATAACAATTCCAGCATGTTTCCAGGAAAACGCGCATAGCCATGGCCAAAGAGGGGGTGTCTCGAATATGCCGGAATTTGGATTTTCCAGCATTTCTCATAGTGGTATCTCATTTCACAATAATAATATAGGGGATAACTCCAACTCAGTGCAACAGTCACCAGCGAGTTCTTCTTTTCTCCCCCAGGAAAAACAGGACCTCAACGGTTTCTGGGGGGTTGATCCTCCACAACCATACTTTCAGAATAATAATAATTTTCAGAGAAAGTGA 2784 0.4224 MGKAQDKMAEATNRQIINSTKCKTAEKSNEHPEWLPDGWIVESKTRKSGANMGCGYKCYIDPTGCKFYSKPEVLRYLETVNSNSHSSKKEKMRKSNDAVEKSTAEDLPPDQIADVKMKKSSNGYRIDPDTVEKSPVEDLPPGWTIEAKVRKGGTGNRKDLFYIDPVSGYVFRSKKDALRYVKSGDISACAIKPFKRQNQDEDKVSDSDKKSQVEDLPPGWITEAKVRKGGTGKKKDLQSSTGKKQKLKQSATNRRHSVDDVLEKNHVVNMMEHASEKNHSNRSLSKTKESNVARRFSRRLSGVEHDQLTCVANEQALQVPKRDFGKKISILDTDLTNKSSQLPSGVLEIGREEQGKVLLNSNKSGTKKEKQIFCRASKRLAGLQPKLMSNSISHKKAYKSKKSKGEVKATLQQSDGQPVMELADHATINGESSNKGRKLPEATPITSNQLKKFDDKEINKDEKSELAQSFAFHYSWSDPCLEFAIQTLTGTLPVEDSTDNGNARVSETNTSPKNRLVENVTGNSSDKTSRVNSKKSKNKKEPTVPRQLSKRLAGNEPEVLPTEKAVEYAAPQKSCNDNVAATASLTNGVSGHPYDREESKLVVQASDRLCRESLSKIEKSYDTKTVPNEQLRRHEDENVDDERSYSQFPTPFGDSWSDPCLEFAIKTLSGALPVDAPAADILPAVTPDVSETPNKETLQSMEQKRIDAETRDDPYQSQTKIEFNTVCHTSKQVQNQPEVTTYSTSCGTDPKFATGESYKDGDSVARNSNGREPQRIKSGNPIEIDINKTILEEEPQPETINYDNSEREFGASFMDSWSDPCLEFAFNTLSGTIPGEENITIPACFQENAHSHGQRGGVSNMPEFGFSSISHSGISFHNNNIGDNSNSVQQSPASSSFLPQEKQDLNGFWGVDPPQPYFQNNNNFQRK* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1602 927 MobiDBLite consensus disorder prediction 1 30 - -
Pvu2g1602 927 MobiDBLite consensus disorder prediction 227 242 - -
Pvu2g1602 927 Pfam Methyl-CpG binding domain 28 82 IPR001739 GO:0003677
Pvu2g1602 927 Pfam Methyl-CpG binding domain 139 184 IPR001739 GO:0003677
Pvu2g1602 927 MobiDBLite consensus disorder prediction 494 559 - -
Pvu2g1602 927 MobiDBLite consensus disorder prediction 197 213 - -
Pvu2g1602 927 MobiDBLite consensus disorder prediction 530 546 - -
Pvu2g1602 927 MobiDBLite consensus disorder prediction 82 109 - -
Pvu2g1602 927 SUPERFAMILY DNA-binding domain 30 83 IPR016177 GO:0003677
Pvu2g1602 927 Gene3D - 108 215 - -
Pvu2g1602 927 MobiDBLite consensus disorder prediction 877 902 - -
Pvu2g1602 927 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 129 201 IPR001739 GO:0003677
Pvu2g1602 927 MobiDBLite consensus disorder prediction 197 293 - -
Pvu2g1602 927 MobiDBLite consensus disorder prediction 252 293 - -
Pvu2g1602 927 MobiDBLite consensus disorder prediction 427 447 - -
Pvu2g1602 927 MobiDBLite consensus disorder prediction 753 773 - -
Pvu2g1602 927 MobiDBLite consensus disorder prediction 877 927 - -
Pvu2g1602 927 PANTHER OS04G0193200 PROTEIN 505 917 - -
Pvu2g1602 927 PANTHER OS04G0193200 PROTEIN 209 236 - -
Pvu2g1602 927 PANTHER OS04G0193200 PROTEIN 246 498 - -
Pvu2g1602 927 PANTHER OS04G0193200 PROTEIN 131 208 - -
Pvu2g1602 927 PANTHER OS04G0193200 PROTEIN 9 128 - -
Pvu2g1602 927 MobiDBLite consensus disorder prediction 494 529 - -
Pvu2g1602 927 SUPERFAMILY DNA-binding domain 137 194 IPR016177 GO:0003677
Pvu2g1602 927 PANTHER OS04G0193200 PROTEIN 209 236 IPR038945 -
Pvu2g1602 927 PANTHER OS04G0193200 PROTEIN 505 917 IPR038945 -
Pvu2g1602 927 PANTHER OS04G0193200 PROTEIN 131 208 IPR038945 -
Pvu2g1602 927 PANTHER OS04G0193200 PROTEIN 9 128 IPR038945 -
Pvu2g1602 927 PANTHER OS04G0193200 PROTEIN 246 498 IPR038945 -
Pvu2g1602 927 MobiDBLite consensus disorder prediction 84 104 - -
Pvu2g1602 927 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 25 97 IPR001739 GO:0003677
Pvu2g1602 927 Gene3D - 16 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1602 Pvu-Chr2 29718163 29729526 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1602 - - vra:106777576 1219.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1602 2 29718163 29729526 Pvu2g2955 2 45073381 45080275 PCT