Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2951 ATGACTCCCTCAGTGCCCTTCTTCTTTCTAATTGCTCTATGCTTCACTTCTGCATATGCCGCAAGGTTTGACATCACAAACCGATGCTCTTACACTGTGTGGGCTGCGGCTGTGCCTGGCGGCGGTAGGATGCTAAACTCGGGCCAGTCATGGGCCCTGGACGTAGCCGCAGGAACCAAAGAGGCCCGCATTTGGGCCCGAACCGGATGCAACTTCGACGGTTCAGGCCGCGGTGGATGCAAGACTGGGGACTGTGGCGGTGTTCTTGAGTGCAACGCATACGGTACACCTCCTAACACCCTAGCGGAATACGCGCTGAACCAGTTCAACAATTTGGACTTCTTCGACATCTCCCTTGTAGACGGTTTCAACGTTCCGATGGAGTTTAGTCCAACGTCGAATGGATGCTCACGTGGCATAACATGCAATGCTGACATCAACGGACAGTGTCCCTCTGAGCTGAAGACTGACGGCGGTTGCAACAACCCATGCACTGTCTTCAAAACCGATGAATACTGTTGCAATTCTGGAAGCTGTTCTGCAACTACTTTTTCCAAATTCTTCAAGGATAGGTGCCCCGATGCTTATAGTTATCCCAAAGATGACCAAACCAGCACCTTCACATGCAACGGTGGAACTAACTATAAGGTTGTCTTTTGCCCTTGA 666 0.512 MTPSVPFFFLIALCFTSAYAARFDITNRCSYTVWAAAVPGGGRMLNSGQSWALDVAAGTKEARIWARTGCNFDGSGRGGCKTGDCGGVLECNAYGTPPNTLAEYALNQFNNLDFFDISLVDGFNVPMEFSPTSNGCSRGITCNADINGQCPSELKTDGGCNNPCTVFKTDEYCCNSGSCSATTFSKFFKDRCPDAYSYPKDDQTSTFTCNGGTNYKVVFCP* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2951 221 Gene3D Thaumatin 21 221 IPR037176 -
Pvu2g2951 221 Pfam Thaumatin family 27 221 IPR001938 -
Pvu2g2951 221 PANTHER OS03G0233200 PROTEIN 7 221 IPR001938 -
Pvu2g2951 221 PANTHER THAUMATIN-RELATED 7 221 - -
Pvu2g2951 221 SUPERFAMILY Osmotin, thaumatin-like protein 21 221 IPR037176 -
Pvu2g2951 221 SMART tha2 23 221 IPR001938 -
Pvu2g2951 221 ProSitePatterns Thaumatin family signature. 76 91 IPR017949 -
Pvu2g2951 221 PRINTS Pathogenesis-related protein signature 22 34 IPR001938 -
Pvu2g2951 221 PRINTS Pathogenesis-related protein signature 41 50 IPR001938 -
Pvu2g2951 221 PRINTS Pathogenesis-related protein signature 63 74 IPR001938 -
Pvu2g2951 221 PRINTS Pathogenesis-related protein signature 76 105 IPR001938 -
Pvu2g2951 221 PRINTS Pathogenesis-related protein signature 113 129 IPR001938 -
Pvu2g2951 221 PRINTS Pathogenesis-related protein signature 211 220 IPR001938 -
Pvu2g2951 221 ProSiteProfiles Thaumatin family profile. 20 221 IPR001938 -
Pvu2g2951 221 PIRSF PR5 1 221 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2951 Pvu-Chr2 45052530 45053480 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2951 7 221 Receptor kinase-like Gene Family AT5G38280 36.364 4.78e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2951 - - gmx:100301882 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2951 2 45052530 45053480 Pvu2g2951 2 45052530 45053480 ECH
Pvu2g1601 2 29701039 29702099 Pvu2g2951 2 45052530 45053480 PCT