Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1601 ATGGCTCACTCACTCTCCCTAACGCCACTTTGCGCCCTCCTCATGCTCGCCTCATTATCTCTCGCCACCGCTGCAAACTTCGAGATCGTCAACAACTGCCCCTACACGGTGTGGGCGGCTGCCAGCCCCGGCGGCGGGCGGCGCCTGGACCGCGGGCAGACGTGGAACCTGTGGGTGAACGCGGGCACTGCCATGGCCCGCATATGGGGTCGCACCGGGTGCAACTTCGACGGCAGTGGGCGAGGGCGGTGCCAGACAGGTGACTGCACCGGCGGCCTGAACTGCCAGGGCTGGGGCGTTCCTCCGAACACCCTGGCGGAGTTCGCCCTGAACCAATTCGGCAACTTGGACTTCTACGACATCTCCCTGGTGGACGGTTTCAACATCCCTATGGACTTCTACCCCGTGAACGGAGGGTGTCACAAAATCAGTTGCACCGCCGACATTAATGGGCAGTGCCCTGGGCCATTAAGGGCCCAAGGGGGATGCAACAACCCCTGCACCGTGTATAAGACGAACGAGTATTGCTGCACCAATGGGCAAGGAACTTGTGGACCCACTACGTACTCTAGGTTCTTCAAAGATAGGTGCCGTGATGCTTACAGTTACCCTCAGGATGACCCTACCAGCACCTTCACTTGCCCTGCTGGTTCTAACTACAAGGTTCTCTTCTGTCCTCTCGGAGATCCTCTTCACATGCTTCCTAATACCACCACCAATCAATATTAA 729 0.583 MAHSLSLTPLCALLMLASLSLATAANFEIVNNCPYTVWAAASPGGGRRLDRGQTWNLWVNAGTAMARIWGRTGCNFDGSGRGRCQTGDCTGGLNCQGWGVPPNTLAEFALNQFGNLDFYDISLVDGFNIPMDFYPVNGGCHKISCTADINGQCPGPLRAQGGCNNPCTVYKTNEYCCTNGQGTCGPTTYSRFFKDRCRDAYSYPQDDPTSTFTCPAGSNYKVLFCPLGDPLHMLPNTTTNQY* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1601 242 SUPERFAMILY Osmotin, thaumatin-like protein 26 226 IPR037176 -
Pvu2g1601 242 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Pvu2g1601 242 PRINTS Pathogenesis-related protein signature 45 54 IPR001938 -
Pvu2g1601 242 PRINTS Pathogenesis-related protein signature 67 78 IPR001938 -
Pvu2g1601 242 PRINTS Pathogenesis-related protein signature 80 109 IPR001938 -
Pvu2g1601 242 PRINTS Pathogenesis-related protein signature 117 133 IPR001938 -
Pvu2g1601 242 PRINTS Pathogenesis-related protein signature 216 225 IPR001938 -
Pvu2g1601 242 PANTHER OS03G0233200 PROTEIN 10 226 IPR001938 -
Pvu2g1601 242 Pfam Thaumatin family 31 226 IPR001938 -
Pvu2g1601 242 SMART tha2 27 226 IPR001938 -
Pvu2g1601 242 ProSiteProfiles Thaumatin family profile. 24 226 IPR001938 -
Pvu2g1601 242 PANTHER PATHOGENESIS-RELATED PROTEIN R MINOR FORM 10 226 - -
Pvu2g1601 242 PIRSF PR5 1 241 IPR001938 -
Pvu2g1601 242 ProSitePatterns Thaumatin family signature. 80 95 IPR017949 -
Pvu2g1601 242 Gene3D Thaumatin 24 227 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1601 Pvu-Chr2 29701039 29702099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1601 1 240 Receptor kinase-like Gene Family AT5G38280 33.962 1.18e-38 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1601 - - gmx:100240704 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1601 2 29701039 29702099 Pvu2g2951 2 45052530 45053480 PCT