Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2950 ATGATTACTCCCTCAATGCCCTTCTTCTTTCTAATCGCTCTATGCTTCACTTCTGCATATGCGGCAAGGTTTGATATCACAAACCGATGCCCTTACACTGTGTGGGCCGCGGCTGTGCCTGGCGGCGGTAGGATGCTAAACTCGGGTCAGTCATGGGCCTTGGACGTAGCCGCAGGAACCAAAGGGGCCCGCATTTGGGCCCGAACCGGGTGTAGCTTCGACGGTTCAGGGCGCGGTGGATGCACGACCGGGGACTGTGGCGGTGTTCTTGAGTGCACCGCATACGGTAGACCTCCCAACACCCTAGCGGAATACGCGCTGAACCAGTTCAACAATTTGGACTTCTTCGACATCTCCCTTGTAGACGGTTTCAACGTTCCGATGGAGTTTAGCCCAACGTCGAATGGATGCTCACGTGGCATAACATGCAATGCTGACATCAACGGACAGTGTCCCTCTGAGCTGAAGACTGACGGCGGTTGCAACAACCCATGCACTGTCTTCAAAACCGATGAATACTGTTGCAATTCTGGAAGCTGTTCTGCAACTACTTTTTCCAAATTCTTCAAGGATAGGTGCCCCGATGCTTATAGTTATCCCAAAGATGACCAAACCAGCACCTTCACATGCAACGGTGGAACTAACTATAAGGTTGTCTTTTGTCCTTGA 669 0.5172 MITPSMPFFFLIALCFTSAYAARFDITNRCPYTVWAAAVPGGGRMLNSGQSWALDVAAGTKGARIWARTGCSFDGSGRGGCTTGDCGGVLECTAYGRPPNTLAEYALNQFNNLDFFDISLVDGFNVPMEFSPTSNGCSRGITCNADINGQCPSELKTDGGCNNPCTVFKTDEYCCNSGSCSATTFSKFFKDRCPDAYSYPKDDQTSTFTCNGGTNYKVVFCP* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2950 222 PANTHER OS03G0233200 PROTEIN 8 222 IPR001938 -
Pvu2g2950 222 SMART tha2 24 222 IPR001938 -
Pvu2g2950 222 Pfam Thaumatin family 28 222 IPR001938 -
Pvu2g2950 222 SUPERFAMILY Osmotin, thaumatin-like protein 22 222 IPR037176 -
Pvu2g2950 222 Gene3D Thaumatin 22 222 IPR037176 -
Pvu2g2950 222 PIRSF PR5 1 222 IPR001938 -
Pvu2g2950 222 PANTHER THAUMATIN-RELATED 8 222 - -
Pvu2g2950 222 ProSitePatterns Thaumatin family signature. 77 92 IPR017949 -
Pvu2g2950 222 CDD TLP-P 24 222 - -
Pvu2g2950 222 ProSiteProfiles Thaumatin family profile. 21 222 IPR001938 -
Pvu2g2950 222 PRINTS Pathogenesis-related protein signature 23 35 IPR001938 -
Pvu2g2950 222 PRINTS Pathogenesis-related protein signature 42 51 IPR001938 -
Pvu2g2950 222 PRINTS Pathogenesis-related protein signature 64 75 IPR001938 -
Pvu2g2950 222 PRINTS Pathogenesis-related protein signature 77 106 IPR001938 -
Pvu2g2950 222 PRINTS Pathogenesis-related protein signature 114 130 IPR001938 -
Pvu2g2950 222 PRINTS Pathogenesis-related protein signature 212 221 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2950 Pvu-Chr2 45042905 45043859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2950 8 222 Receptor kinase-like Gene Family AT5G38280 37.603 3.48e-44 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2950 - - gmx:100301882 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2950 2 45042905 45043859 Pvu2g2950 2 45042905 45043859 ECH
Pvu2g1600 2 29697177 29698139 Pvu2g2950 2 45042905 45043859 PCT