Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2667 ATGATGAAGTGCTTCTCTCTGTGCTTAGTCTCCTTTTGGGTTCTTCTTTCTCTCTGTTTGCCAAGTGTGTCATCTCAAAATATATCTGGGAGTGGCCTGCAGCAAGCTAGCCTCCCACCAAGAGGTTGGAATTCTTATGATTCCTTTTGCTGGACAATTTCTGAAGATGAATTCTTAGAAAGTGCTGAAATAGTTTCTCAACGTCTCAAGGCTCATGGATATGAGTTTGTCGTGGTGGATTACCTCTGGTATAGGAAGAAAATCAAAGGTGCTTATCCCGATTCTCTTGGATTTGACGTGATTGATGAATGGGGAAGGATGCTCCCAGACCCGGGAAGGTGGCCTTCTTCCACAGGTGGGAAGGGTTTCAGTGAAGTAGCTGATAAAGTACATAGTTTGGGTTTGAAGTTTGGGATTCATGTTATGAGAGGGATAAGCACTCAAGCTGTCAACGCAAACACCCCTATCTTAGATACAACAAAGGGAGGTGCATATAAAGAATCTGGACGAGTGTGGCATGCAAAAGACATAGCAATCCCAGAAAAGGCTTGTGCATGGATGCCTCACGGTTTTATGAGTGTAAATACAAAGTTAGGAGCTGGGAGAGCTTTTTTGAAATCTCTTTATGCGCAGTATGCAGCATGGGGTGTTGATCTAGTGAAACATGACTGTGTGTTTGGCGATGACTTGGAACTAAATGAAATCAGCTATGTGTCAGAGGTTCTCAGTGAGCTTAATCGCCCTATTGTGTATTCTCTGTCTCCTGGAACCAGTGTGACACCAGCAATGGCCAAGGATGTCAGTGGACTAGTCAACATGTATCGAATAACAGGAGATGACTGGGATAGTTGGGGGGATGTCAGGGCTCATTTTGACGTAACAAGGGATTTTTCTAGAGCTGATATGATAGGAGGAAAAGGTCTAAAGGGAAATTCCTGGCCTGATTTGGACATGCTACCATTTGGATGGCTAACTGATCCAGGTTCAAATGAAGGTCCACACAGGTTTAGTAGGCTCAATCTTGAAGAAAAAAGGACACAGATGACGTTGTGGTCTTTGGCGAAGTCTCCCTTTATGTATGGTGGGGATGTGCGGAAGATCGATGCTAGCACTTACGAACTTATAACAAATCCTACCCTGCTTGAGATTAATTTCTTCAGCTCAAATAATAAGGAGTTTCCTTATATCACAAGCTCAAATAACTTGAAGAACCCTGAAAGACCGAAGCAAGGAACAAAGGCATCATCATATACACATTCATTAGGTTTGATTGGCTGTAGCGAATCAAAGGCGAGTGGTTGGTCTATTGAAAGTCATAACCAATATCTTGAAACAATCTGCTGGAAAAAGGGTGTAGAAAACCAGCACCAAGCTCCATTCTGCGTAAACAAGAGAGAACTTAAACTCAGATTAGATGGTGAGACTACGTCTCAACAGGACTATCGAGGGAAACATCAACTAGTTGCTACTGACAGAATGAAATTTTGCTTAGACGCTTCTCCAAAACGAAAGGTTACTTCTAAAGAGTTCAAGAGAGGAACATTTTCTCCATGCAGATGGGATTCAAATCAGATCTGGGAACTGCACTCCAATGGAACCATGGTAAATAGTTACTCCGGTCTTTGTGCAACAGTAAAGCTTGTTGAAGATGAGGCTAAGGCTGGTGGGATTCGCTCTTGGACTGCAACAGGAAGAAAAGGGGAAATCTATCTTGCTTTCTTCAATCTAAGCGATGAGAAGACGAAGATATATGCAAAGACATCATATCTGGAGAAGGTTCTTTCTGACAGAAAGATCGATTCATGCAAGGGGACGGAAGTGTGGAGTGGAAAGGATGTCGTCACAACACAGGGGATGATATCAATGAACGTGGAAACTCATGGATGTGCACTATTTGTTCTAAATTGCAACTAG 1914 0.4279 MMKCFSLCLVSFWVLLSLCLPSVSSQNISGSGLQQASLPPRGWNSYDSFCWTISEDEFLESAEIVSQRLKAHGYEFVVVDYLWYRKKIKGAYPDSLGFDVIDEWGRMLPDPGRWPSSTGGKGFSEVADKVHSLGLKFGIHVMRGISTQAVNANTPILDTTKGGAYKESGRVWHAKDIAIPEKACAWMPHGFMSVNTKLGAGRAFLKSLYAQYAAWGVDLVKHDCVFGDDLELNEISYVSEVLSELNRPIVYSLSPGTSVTPAMAKDVSGLVNMYRITGDDWDSWGDVRAHFDVTRDFSRADMIGGKGLKGNSWPDLDMLPFGWLTDPGSNEGPHRFSRLNLEEKRTQMTLWSLAKSPFMYGGDVRKIDASTYELITNPTLLEINFFSSNNKEFPYITSSNNLKNPERPKQGTKASSYTHSLGLIGCSESKASGWSIESHNQYLETICWKKGVENQHQAPFCVNKRELKLRLDGETTSQQDYRGKHQLVATDRMKFCLDASPKRKVTSKEFKRGTFSPCRWDSNQIWELHSNGTMVNSYSGLCATVKLVEDEAKAGGIRSWTATGRKGEIYLAFFNLSDEKTKIYAKTSYLEKVLSDRKIDSCKGTEVWSGKDVVTTQGMISMNVETHGCALFVLNCN* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2667 637 Gene3D Aldolase class I 31 386 IPR013785 -
Pvu2g2667 637 SUPERFAMILY Glycosyl hydrolase domain 553 635 - -
Pvu2g2667 637 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 3 634 IPR002241 GO:0004553|GO:0005975
Pvu2g2667 637 PRINTS Glycosyl hydrolase family 27 signature 33 52 IPR002241 GO:0004553|GO:0005975
Pvu2g2667 637 PRINTS Glycosyl hydrolase family 27 signature 127 148 IPR002241 GO:0004553|GO:0005975
Pvu2g2667 637 PRINTS Glycosyl hydrolase family 27 signature 342 363 IPR002241 GO:0004553|GO:0005975
Pvu2g2667 637 Gene3D - 551 636 IPR013780 -
Pvu2g2667 637 SUPERFAMILY Ricin B-like lectins 486 549 IPR035992 -
Pvu2g2667 637 CDD GH27 39 384 IPR002241 GO:0004553|GO:0005975
Pvu2g2667 637 Pfam Alpha galactosidase C-terminal beta sandwich domain 555 634 IPR041233 -
Pvu2g2667 637 Pfam Alpha galactosidase A 211 384 IPR002241 GO:0004553|GO:0005975
Pvu2g2667 637 SUPERFAMILY (Trans)glycosidases 36 384 IPR017853 -
Pvu2g2667 637 PANTHER ALPHA-GALACTOSIDASE 3 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2667 Pvu-Chr2 42515594 42521471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2667 12 469 Glycoside Hydrolase AT3G26380 66.377 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2667 - - gmx:100783705 1135.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2667 2 42515594 42521471 Pvu2g2667 2 42515594 42521471 ECH
Pvu2g2667 2 42515594 42521471 Pvu1g2638 1 51212464 51218348 PCT