Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2611 ATGGCAGCAACAATATCAGCAATGGCCATGATCAACGCCAAATGCCTCAACCCCACGTCACCCAAATTCCCCACCAAACTCACAACCTCAAAACCTTCTCTCCTTTCTCTTCCCAAGGGCCTTGTCGCCTCACCCGAAACCACCAACCTCTCCATTCCCACAGCCGTCGCGGGAGCCATATTCACGGCCCTCGGAACCTGCGACGCCGCGTTCGCCGTCCAGCAGATAGCGGATATAGCGGAAGGCGACAACCGCGGCCTGGCCCTGCTGCTGCCCATAATCCCAGCCATAGGGTGGGTGCTGTTCAACATCCTGCAGCCGGCGCTCAACCAAATCAACCGTATGCGCAGCACCAAAGGACTCATCATCGGGTTGGGTCTTGGCGGCTTGGCAGGACTCATGGCGGCGCCGCCACATGCAGCTGCCGCTGAAGTGGCGTCGATCGCCGAAGCCGCGAGCGACAACAGGGGCCAGCTTCTGCTGTTTGTGGTGACACCGGCTATTGGGTGGGTGCTGTACAACATCTTGCAGCCTGCTCTGAACCAGATCAACAGGATGAGATCCCAGTGA 570 0.5895 MAATISAMAMINAKCLNPTSPKFPTKLTTSKPSLLSLPKGLVASPETTNLSIPTAVAGAIFTALGTCDAAFAVQQIADIAEGDNRGLALLLPIIPAIGWVLFNILQPALNQINRMRSTKGLIIGLGLGGLAGLMAAPPHAAAAEVASIAEAASDNRGQLLLFVVTPAIGWVLYNILQPALNQINRMRSQ* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2611 189 Hamap Photosystem II protein Y [psbY]. 83 117 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Pvu2g2611 189 Pfam Photosystem II protein Y (PsbY) 154 186 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Pvu2g2611 189 Pfam Photosystem II protein Y (PsbY) 83 115 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Pvu2g2611 189 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 189 IPR038760 GO:0009523
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2611 Pvu-Chr2 42013446 42014685 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2611 K02723 - gmx:100779397 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2611 2 42013446 42014685 Pvu1g2654 1 51333848 51334501 PCT