Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2494 ATGGACTCATCGTTTCCAGGCCCAAACCACCTAAACGACCAAAACGACGACGTTTTCCTCGACGCCTTACCTCACTGCCCCTTCGACCATTGTCTCGCTACCGCTGATACTTCACCGGAATCTTCCACCGATGCTTCTATTCTTTCCGACCTCAACCCTCCCCCTCCATCTCCGGCGACCACAATCCGCCGCCGTTCATCCCGCCGTCATTCTCCAGCTTCGGAACCCACGAAAACCGGTTCCGACGATACTTCGACCACCGTTCCCTTTACGAACCTAAGGAGCGATAGAAGCCTCGAAACTCCGAAAGAAAACGAGGATTCCCTCGAGAAATGCGATTCGAAACAAAAGAAACTTCGTTCCTCTCCATCTCCAAGCGTTGCCACCGAAGAGGGTGGCGAGGAATCGACGTTAACCACCGCCGAAAATGACGAAGGAACCACCGATTCCGCGGACTCGGCCGTGGAACTCGGTAATCCCCCTATTAACTCACTCGATTATGTAACGGGTTTGGTGATTAGAGCAATTGTGTTCCAAATCAATGTTTTTTTTGTGTTAGTGAAATGCCCGATGTGGTTTATGATACACGCTTTCATGTTTTTTATGGACCCTTTTGGAGCAATTAGAAAGGGGAAGGGATTGTTGGTGGATATTTTGGGTAGAGTGTTGTGTGGTGTTTTTGGCTGCATTGGTTCTTCAGCTCAGGGGATGTTAAAAGAGCACAAGTCTTTGTGGAATGTTGCATTTAGGTGTGGGTGGGGATTGTTGTGGTCAGTCTATGTTTGTTGCATTTTATTTGCTCTTTTGGTTTGTTCTCTTGTGGTGAGTGGGTTTTTGATGAAGAGTTTGGTGGAGAAGCCTTTTCAGATGAGTCAGGGTTTTAACTTTGATTACACCAAGCAGAGTCCTGTTGCATTGGTGCCTGTAATGTCTTGTGATAATGTTGGGGGTGGGCATGATTCTAAGACGAACGTTGCTGTTGGAGAGTGGATGGGTAGAAGGGTTATACCTGCTAAGCAGAAGGTGCAGGTCACTGTTTCATTGGTTGTGCCAGAGTCAGAATACAACACAAATCTAGGCATCTTTCAGATCAAGCTAGACTTCTTGTCTTTTGATGGCAAAACAATTTGGACTGCAAACCAACCTTGCATGTTAAAATTCATAAGCGAGCCTATCCGGCTAATGATGACATTCCTCAAGATTGTACCACTTGTCACTGGTTTTATATCAGAAACCCAGACACTGAATATCAAGCTGAGAGGTTTTGTTGAAGGGAATGTACCAACTTCATGCTTAAAAATAACACTTGAGCACCGAGCAGAATATCCACCTGGTGCTGGCATTCCTCAAATATATGATTCATCGGTTATTATTGAATCAGAACTTCCCTTATTCAAGAGAATCATATGGCATTGGAAGTTGAGCATATTTGTATGGATCTCAATGATGGCTTTTATGATGGAGTTACTATTTGTTCTAGTGTGTTGCTTGCCTATAATTATTCCAAGAACCAGGCAAGGGAGTGGTTCTGCTCCTGTTACTGGTACTTCAAGTTGA 1557 0.4496 MDSSFPGPNHLNDQNDDVFLDALPHCPFDHCLATADTSPESSTDASILSDLNPPPPSPATTIRRRSSRRHSPASEPTKTGSDDTSTTVPFTNLRSDRSLETPKENEDSLEKCDSKQKKLRSSPSPSVATEEGGEESTLTTAENDEGTTDSADSAVELGNPPINSLDYVTGLVIRAIVFQINVFFVLVKCPMWFMIHAFMFFMDPFGAIRKGKGLLVDILGRVLCGVFGCIGSSAQGMLKEHKSLWNVAFRCGWGLLWSVYVCCILFALLVCSLVVSGFLMKSLVEKPFQMSQGFNFDYTKQSPVALVPVMSCDNVGGGHDSKTNVAVGEWMGRRVIPAKQKVQVTVSLVVPESEYNTNLGIFQIKLDFLSFDGKTIWTANQPCMLKFISEPIRLMMTFLKIVPLVTGFISETQTLNIKLRGFVEGNVPTSCLKITLEHRAEYPPGAGIPQIYDSSVIIESELPLFKRIIWHWKLSIFVWISMMAFMMELLFVLVCCLPIIIPRTRQGSGSAPVTGTSS* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2494 518 MobiDBLite consensus disorder prediction 119 154 - -
Pvu2g2494 518 PANTHER BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN 1 517 IPR009617 GO:0019915
Pvu2g2494 518 MobiDBLite consensus disorder prediction 77 96 - -
Pvu2g2494 518 MobiDBLite consensus disorder prediction 35 50 - -
Pvu2g2494 518 MobiDBLite consensus disorder prediction 1 155 - -
Pvu2g2494 518 Pfam Putative adipose-regulatory protein (Seipin) 267 484 IPR009617 GO:0019915
Pvu2g2494 518 MobiDBLite consensus disorder prediction 97 118 - -
Pvu2g2494 518 PANTHER PROTEIN (SEIPIN), PUTATIVE-RELATED 1 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2494 Pvu-Chr2 40915942 40918682 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2494 K19365 - gmx:100813988 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2494 2 40915942 40918682 Pvu2g2494 2 40915942 40918682 ECH
Pvu6g1772 6 28169981 28172724 Pvu2g2494 2 40915942 40918682 ECH
Pvu2g2494 2 40915942 40918682 Pvu6g1772 6 28169981 28172724 PCT