Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2321 ATGGAAGTGCGGTCGTTTTTGGACAGCATGAACATGAAACCTGGGGACAGATTGTTCGACCACATAGACAGGGCCATTCTCGGGTCTAAAGTGGGTGTTGCGGTGTTTTCACCACGTTACTGTGAGTCCTATTTTTGTCTCCATGAGCTCGCTCTTTTCATGGAGTCAAAGAAGAGGGTTATCCCCATCTTCTACGACGTGAAACCTTCCGAGCTTGTGGTCAAAGACAACGGAACTTGTCCTGCTAAAGAGCTTCAGAGGTTCTCTTTGGCACTCGAGGAAGCTAAATACACTGTTGGATTGACCTTTGATTCTTTGAAAGGGGACTGGTCGGAGATACTGAGAGATGCTTCAGATGCAGTGATCATGAACTTGCTGGAGGTAGAGGAAGAGCGAAAAACCATGAAGAGGAAACTGTGA 420 0.469 MEVRSFLDSMNMKPGDRLFDHIDRAILGSKVGVAVFSPRYCESYFCLHELALFMESKKRVIPIFYDVKPSELVVKDNGTCPAKELQRFSLALEEAKYTVGLTFDSLKGDWSEILRDASDAVIMNLLEVEEERKTMKRKL* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2321 139 Pfam TIR domain 3 80 IPR000157 GO:0007165
Pvu2g2321 139 Gene3D - 1 86 IPR035897 -
Pvu2g2321 139 PANTHER TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN FAMILY PROTEIN 3 136 - -
Pvu2g2321 139 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 96 IPR035897 -
Pvu2g2321 139 ProSiteProfiles TIR domain profile. 1 118 IPR000157 GO:0007165
Pvu2g2321 139 PANTHER COP1-INTERACTING PROTEIN-RELATED 3 136 - -
Pvu2g2321 139 SMART till_3 2 107 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2321 Pvu-Chr2 39038069 39039040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2321 6 104 Miscellaneous Gene Families AT1G57670 31.579 4.76e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2321 - - gmx:100798207 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2321 2 39038069 39039040 Pvu6g1958 6 29693296 29693943 PCT