Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1817 ATGCCTCCCTCTCAATTTCCTCTTCGTTGGGAAACTACAGGTGACCAGTGGTGGTATGCATCTCCCATTGATTATGCTGCTGCAAATGGCCTCTATGATCTCGTCACTGAGCTTCTCCACCTTGACACCAACCTCCTCATCAAGCTCACCTCCCTCCGCCGAATTCGCCGCCTTGAAGCCGTCTGGGACGATGAGTCTAGGTTTGAGGATGTCGCCAAGTGCCGCTCCAAGGTTGCTAGGAATCTTATGCTCGAGTGTGAGATAGGAAAAGGGCACAACTCTCTCATCCGTGCAGGCTATGGTGGATGGCTTCTCTACACTGCTGCTTCGGCTGGGGATGCTCACTTTGTTCTCGAGTTGTTGGGGAGAGACCCTTTGTTGGTGTTTGGTGAAGGAGAGTATGGTGTCACTGACATGCTGTATGCTGCAGCCAGGGGCAAGAACTGTGAGGTCTTTAAACTCCTGCTTCATTCTGCTCTGTCAAGAAAGGATACTCTTGCTGGCACTGAAGCAGAATTGGAAGACAAGTTGGATGAAGGTTCTAAGGTTTTCAAGAGGGATGTGATGAATAGGGCCATTCATGCTGCTGCCAGAGGAGGGAATTGGGAAATACTGAAGCAGCTTCTAGGAAGTGTTTCTGCTTCTCAGATTTTCTCTTATAGAGATTCCCAAGGATCTACTGTCTTGCATGCAGCTGCTGCAAGAGGCCAGGTTGAGGTTGTGAGAAATCTAATTGAATCCTATGATATCGTCAACTCAATTGATGCTCAAGGAAATACAGCATTACATGTAGCTTCTTACAGAGGTTACTTACCCGTGGTAGAGATTCTGATTGGAGCATCTCCCTCATTAACAACTTTAGCCAATAACTATGGAGATACTTTTCTTCACATGGCAGTGGTTGGTTTCAGAAGCCCTGGTTTCTGTAGACTGGACAAGCACATCGAACTCATGAAGCAATTGACAACTGAAAAGATTGTGAGCATGAAGGACATCATCAATGTCAGGAACAATGAAGGAAGAACAGCTCTTCATGTTGCTGTGATGCATAATATCAAATGTGATGTGGTGGAATTACTGATGTCTGTTTCATCAATTGATTTGAACATTCGTGATGCTGATGGCGTGACCCCTTTGGATCATCTTAGGCGAAGATCAAGTTCAGCATCTTCTGACATTTTGATCAAGCAGTTAATTTCAGCTGGAGGGATCTCTAATTGTACGGACTATATGACAAGAAATGCTCTTGTTAGCCATCTTAGGACTCATGGTATTGGAGCCAGTCCTGGAACATCATTTAGAATACCAGATTCTGAAATATTGTTGTACACTGGCATTGAGAATTCATGTGATACCAATTATGATCAGGCAAGTGTGGAATCAAATTCATGGTCAAGTGAAATAAACAATTATGACTCAGCCAATTCCCCATGCAACAGCAACTTTAGTTCTGTTAATTATGGTCCAAGGCGTTTGAAGTTTCTGCTCCAGTGGCATGGGATAAGAGACACAAAAGAAGCAGCCTCGGAGTTGGAAGATGATATTTCTGTGAATTCTTTTAGTTCAAGGAACAACTTGGAAGACCTTCCCATCCCATTGAGGCAAAAATACTCAAAAATGTGTTCTCTTCCAAACAACAAAAGAACATTATCTATAAAGACTTATCTTCCAAGTGCTTCAGCCAAAAAATATTTTCATGCAGGTCTAATGCAAGGCGTGATTAAGGTAAAGCCACAAGGCCCTCTACCTGTTCATTCAACTTCTAGTCTTTTTCAGGAACTATCTATCTCTTCTCATGCTTCGAATAATAAGCAAAATCGTGTTGATATAATGGAACCCTCATGCTCAAATCGACCAATGCATGGTGGTGGCAGCCTACACTTGAACTATAAGCAGGGCTCTTTCAATAAGAAAATGATGAACCGGTATTTTTCTTTTGGAGCACATGGCCAGGCTTTGGAAGATGCAAATAGCTGCACAAAGTCAAGTCGCAGCTCTAAGAATTTTAGTTCTTTAGTTGCATAA 2025 0.4311 MPPSQFPLRWETTGDQWWYASPIDYAAANGLYDLVTELLHLDTNLLIKLTSLRRIRRLEAVWDDESRFEDVAKCRSKVARNLMLECEIGKGHNSLIRAGYGGWLLYTAASAGDAHFVLELLGRDPLLVFGEGEYGVTDMLYAAARGKNCEVFKLLLHSALSRKDTLAGTEAELEDKLDEGSKVFKRDVMNRAIHAAARGGNWEILKQLLGSVSASQIFSYRDSQGSTVLHAAAARGQVEVVRNLIESYDIVNSIDAQGNTALHVASYRGYLPVVEILIGASPSLTTLANNYGDTFLHMAVVGFRSPGFCRLDKHIELMKQLTTEKIVSMKDIINVRNNEGRTALHVAVMHNIKCDVVELLMSVSSIDLNIRDADGVTPLDHLRRRSSSASSDILIKQLISAGGISNCTDYMTRNALVSHLRTHGIGASPGTSFRIPDSEILLYTGIENSCDTNYDQASVESNSWSSEINNYDSANSPCNSNFSSVNYGPRRLKFLLQWHGIRDTKEAASELEDDISVNSFSSRNNLEDLPIPLRQKYSKMCSLPNNKRTLSIKTYLPSASAKKYFHAGLMQGVIKVKPQGPLPVHSTSSLFQELSISSHASNNKQNRVDIMEPSCSNRPMHGGGSLHLNYKQGSFNKKMMNRYFSFGAHGQALEDANSCTKSSRSSKNFSSLVA* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1817 674 Pfam Ankyrin repeats (3 copies) 193 284 IPR002110 GO:0005515
Pvu2g1817 674 Pfam Ankyrin repeat 340 372 IPR002110 GO:0005515
Pvu2g1817 674 ProSiteProfiles Ankyrin repeat profile. 257 289 IPR002110 GO:0005515
Pvu2g1817 674 ProSiteProfiles Ankyrin repeat region circular profile. 224 246 - -
Pvu2g1817 674 ProSiteProfiles Ankyrin repeat profile. 224 256 IPR002110 GO:0005515
Pvu2g1817 674 SMART ANK_2a 339 370 IPR002110 GO:0005515
Pvu2g1817 674 SMART ANK_2a 100 129 IPR002110 GO:0005515
Pvu2g1817 674 SMART ANK_2a 188 219 IPR002110 GO:0005515
Pvu2g1817 674 SMART ANK_2a 291 331 IPR002110 GO:0005515
Pvu2g1817 674 SMART ANK_2a 134 164 IPR002110 GO:0005515
Pvu2g1817 674 SMART ANK_2a 374 409 IPR002110 GO:0005515
Pvu2g1817 674 SMART ANK_2a 18 47 IPR002110 GO:0005515
Pvu2g1817 674 SMART ANK_2a 224 253 IPR002110 GO:0005515
Pvu2g1817 674 SMART ANK_2a 257 286 IPR002110 GO:0005515
Pvu2g1817 674 MobiDBLite consensus disorder prediction 655 674 - -
Pvu2g1817 674 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 1 669 - -
Pvu2g1817 674 Gene3D - 11 422 IPR036770 -
Pvu2g1817 674 ProSiteProfiles Ankyrin repeat region circular profile. 257 278 - -
Pvu2g1817 674 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 1 669 - -
Pvu2g1817 674 SUPERFAMILY Ankyrin repeat 104 395 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1817 Pvu-Chr2 32733772 32737019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1817 194 380 Miscellaneous Gene Families AT2G31820 34.043 6.94e-18 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1817 - - gmx:100791999 1176.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2674 1 51470071 51473169 Pvu2g1817 2 32733772 32737019 PCT