Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2674 ATGTCTCCTTCACACTTGCCTCTTCGCTGGGAGAGCACCGGGGAACAGTGGTGGTACGCTTCTCCGATCGATTGCGCCGCCGCGAACGGCCACTACGATCTGGTGGTGGAGCTTCTCCACCTCGACAGCAACCTCCTCATTAAGCTCACTTCCCTCCGCAGAATTCGGCGCCTCGAAACAGTGTGGGACGACGAGGAGCACTTCGAGGACGTCGCGAAATGCCGCTCGCAGGTTGCCAGGAACCTCATGCTGGAATGCGAGACGGGAAGAGGAACCAACTCTCTCATTCGCGCCGGCTACGGCGGGTGGCTCCTCTACACCGCCGCCTCGGCCGGCGACGCGGATTTCGTCCGGGAACTGTTGGGGAGGAACCCTGCGCTTGTGTTCGGAGAAGGAGAATATGGAGTCACTGATATAATGTATGCTGCTGCGAGGAGCAATAACTGTGAGGTGTTTGAGGTTGTGCTTCGTTCTGCTCTCTCGCCGGCGCAGATGGAGGAGATTTGCCAGAGGGATATGATGAATAGGGCGGTTCATGCTGCTGCGAGAGGAGGGAACTGGGAGATGCTGAAACAGCTTGTGGGAGAGGGTTGTGGCGTTTTGGGGTTTAGAGATGCTCAAGGGTGCACTGTTTTGCATACTGCAGCTGCCAGAGGACAGGTTCAGGTGGTGAGAAATCTACTTGCATCATTTGATGTTGTAAACTTGACAGATGATCAAGGGAACACACCGTTACATGTAGCATCTTACGGGGGTCACTTACCTGTGGTGGAGATTCTGATTCTTGCATCCCCTTCATTAGCATTGTTAACCAACCACTATGGAGATACTTTTCTTCATATGGCAGTGGCTGGTTTCAGAAGTCCCGGTTTCCGAAGACTGGACAAACATGCTGAGCTCATGAAGCAATTGGTTTGTGGAAAGATTGTGAACTTACAGGACATTATCAATGTCAAGAACAATGATGGAAGAACGGTTCTTCATGTATCCGTGATTGATAATGTTCAGTGCGAGCTAGTGGAAATGTTGATGTCTGTGCCATCAATTGATCTGAACATTTGTGATGCTGATGGGATGACCCCTTTGGATCTTCTAAAACAAAGACCACAATCAGCATCTTCTGATATTTTGATCAAGATGATGATTTCCTCTGGAGGGGTATCTAATGGTGGAAATGCTATAGCAGGAAATGCCCTTTGCACTCATCACAAAGCACATGTCATTGGAGGCAGTCCTGGCACTTCATTCAGAATACCAGATGCAGAGATATTCTTGTACACTGGCAATGAGAATTCATCAGAGGCCAATTATGATGAAGCAAGTGTGGAATCATATTCCTCCTCAAACGAACCAAGCAATTCTGAATCCGATGATTCCCCAGATAACAAGAAGTCTAATTATTCTGCCAATTCTGCTGTAAAACGTTCAAAGTTTCATCTGGGGTGGCCTAAAAGAAAAGGGACAAAAGCAGCTGCATCAGAAGTAGAAAATGATGATTCTCTTGATCCTTTTAGTTCAAGTAGAAACTTGGAAGAGTTTTCAATTCCATTGCGGCAAAGATACTCACAATCACAACCATGCTCCCTTCCAAACAACAAAAGAACACAATCTATCAGGACTTCTCTTCCAAATCCATTCTCCAAAGTGAAATTCAGTGCTGGCCTGATGCAAGGTGTAATGCAGGTAAAGCCACATTTTGCTCATAGTCCTTTCCAAGAATTATCTGTGGCTTCTCTTTCTTCCATCAAGAAACAAAAGGGTACTTCTTGCTCTAATCCACCATCAGATGATGAGGAACTTCTGTTGAACTACAAACATTGTTCCTTCAATAAAAAATTGATGAATAGGTATTTTTCTTTTGGGGCACAAGGCCTGGCTGTTGACAATTCCAATAGCTGTGCAAAGTCAAACAGGAGTTACAAGCATTTGAGTTCCACAGTTGCCTAA 1947 0.4648 MSPSHLPLRWESTGEQWWYASPIDCAAANGHYDLVVELLHLDSNLLIKLTSLRRIRRLETVWDDEEHFEDVAKCRSQVARNLMLECETGRGTNSLIRAGYGGWLLYTAASAGDADFVRELLGRNPALVFGEGEYGVTDIMYAAARSNNCEVFEVVLRSALSPAQMEEICQRDMMNRAVHAAARGGNWEMLKQLVGEGCGVLGFRDAQGCTVLHTAAARGQVQVVRNLLASFDVVNLTDDQGNTPLHVASYGGHLPVVEILILASPSLALLTNHYGDTFLHMAVAGFRSPGFRRLDKHAELMKQLVCGKIVNLQDIINVKNNDGRTVLHVSVIDNVQCELVEMLMSVPSIDLNICDADGMTPLDLLKQRPQSASSDILIKMMISSGGVSNGGNAIAGNALCTHHKAHVIGGSPGTSFRIPDAEIFLYTGNENSSEANYDEASVESYSSSNEPSNSESDDSPDNKKSNYSANSAVKRSKFHLGWPKRKGTKAAASEVENDDSLDPFSSSRNLEEFSIPLRQRYSQSQPCSLPNNKRTQSIRTSLPNPFSKVKFSAGLMQGVMQVKPHFAHSPFQELSVASLSSIKKQKGTSCSNPPSDDEELLLNYKHCSFNKKLMNRYFSFGAQGLAVDNSNSCAKSNRSYKHLSSTVA* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2674 648 Gene3D - 164 384 IPR036770 -
Pvu1g2674 648 MobiDBLite consensus disorder prediction 521 541 - -
Pvu1g2674 648 Pfam Ankyrin repeats (3 copies) 179 261 IPR002110 GO:0005515
Pvu1g2674 648 Gene3D - 13 163 IPR036770 -
Pvu1g2674 648 SMART ANK_2a 134 164 IPR002110 GO:0005515
Pvu1g2674 648 SMART ANK_2a 240 269 IPR002110 GO:0005515
Pvu1g2674 648 SMART ANK_2a 357 390 IPR002110 GO:0005515
Pvu1g2674 648 SMART ANK_2a 322 353 IPR002110 GO:0005515
Pvu1g2674 648 SMART ANK_2a 18 47 IPR002110 GO:0005515
Pvu1g2674 648 SMART ANK_2a 207 236 IPR002110 GO:0005515
Pvu1g2674 648 SMART ANK_2a 274 314 IPR002110 GO:0005515
Pvu1g2674 648 SMART ANK_2a 173 203 IPR002110 GO:0005515
Pvu1g2674 648 SMART ANK_2a 100 129 IPR002110 GO:0005515
Pvu1g2674 648 SUPERFAMILY Ankyrin repeat 104 378 IPR036770 -
Pvu1g2674 648 ProSiteProfiles Ankyrin repeat region circular profile. 207 228 - -
Pvu1g2674 648 MobiDBLite consensus disorder prediction 435 507 - -
Pvu1g2674 648 MobiDBLite consensus disorder prediction 435 455 - -
Pvu1g2674 648 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 1 645 - -
Pvu1g2674 648 ProSiteProfiles Ankyrin repeat region circular profile. 240 261 - -
Pvu1g2674 648 ProSiteProfiles Ankyrin repeat profile. 207 239 IPR002110 GO:0005515
Pvu1g2674 648 ProSiteProfiles Ankyrin repeat profile. 240 272 IPR002110 GO:0005515
Pvu1g2674 648 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 1 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2674 Pvu-Chr1 51470071 51473169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2674 90 364 Miscellaneous Gene Families AT2G31820 32.014 3.89e-19 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2674 - - vun:114165357 1037.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2674 1 51470071 51473169 Pvu1g2674 1 51470071 51473169 ECH
Pvu1g2674 1 51470071 51473169 Pvu2g1817 2 32733772 32737019 PCT