Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1797 ATGCCTGGTTTTGTGGCCGAAAAGAAGAGATATACAGACCCAAATATGTGTTTTCCCAATTTGGCCAACCATGGTAAACCAACCTTTTCGAAAAGCAATCGTTGTGTGAGGTCTGAGGCTCTAGATGATGATGATGACGATAGTAGTATCCCCATTCTACCTGGGTTGCCTGACGATGTTTCAAAGCACTGCCTTGCACTTGTGCCTCGTTCTAACTTCCCTGCCATGGGCGGTGTAAGTAAGAGATGGAGAGGCTTTATTCGAAGCAAAGAATTTATAACCGTGAGAAAATTGGCTGGGATGCACGAGGAATGGCTCTATATCTTAACAGCCGGTAGTGAAGGAAAAGGGAGCCATTGGGAGGTCATGGATTGTCTTGGTCACAATCGCCGATCCCTTCCACCAATGCCTGGTCCAGCCAAGGCTGGCTTTGGGGTGGCGGTTCTCAATGGAAAGCTCCTTATTATGGCTGGCTGTTCATCAATTGATGGAACTGCATCTGTCTCGGAAGAGGTTTATCAATATGATTCTTGTCTCAACAGCTGGAGCAGATTATCAAGCATGAATGTGGCTCGGTATGACTTTGCTTGTGCTGAAGTCAATGGCTTGGTTTATGCTGTTGGAGGCTATGGTGCAAACGGTGACAGTCTCTCCTGTGCAGAGGTGTATGATCCGGATACCAACAAGTGGACGCCAATAGAGAGCCTCCGTCGTCCAAGATGGGGTTGCTTTGCCTGTGGATTTGAAGGGAAGCTCTATGTCATGGGTGGAAGATCAAACTTTACAATTGGAAATTCCAAGTTTGTTGATGTGTACAACCCAGAGAAGCATGACTGGTGTGAGATGAAAAATGGGTGTGTGATGGTCACTGCTCATGCAGTGCTGGGAAAGAAGTTGTTCTGTATGGAGTGGAAAAACCAGCGGAAGTTAGCAATATTCAATCCAGAGGACAATTCATGGAAAATGGTACCAGTCCCTTTGACAGGGAGTTCAAGCATTGGTTTTCGGTTTGGGATATTGGATGATAAGTTGTTGCTGTTCTCACTGGAGGAAGAGCCTTCATATAGGACTTTGTTGTATGATCCAAGTGCAGCCCCAGGATCTGAGTGGCAGACTTCTGATATAAGACCATCTGGTTTGTGCTTATGCAGTGTAACTATTAAGGCCTGA 1170 0.4607 MPGFVAEKKRYTDPNMCFPNLANHGKPTFSKSNRCVRSEALDDDDDDSSIPILPGLPDDVSKHCLALVPRSNFPAMGGVSKRWRGFIRSKEFITVRKLAGMHEEWLYILTAGSEGKGSHWEVMDCLGHNRRSLPPMPGPAKAGFGVAVLNGKLLIMAGCSSIDGTASVSEEVYQYDSCLNSWSRLSSMNVARYDFACAEVNGLVYAVGGYGANGDSLSCAEVYDPDTNKWTPIESLRRPRWGCFACGFEGKLYVMGGRSNFTIGNSKFVDVYNPEKHDWCEMKNGCVMVTAHAVLGKKLFCMEWKNQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGILDDKLLLFSLEEEPSYRTLLYDPSAAPGSEWQTSDIRPSGLCLCSVTIKA* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1797 389 PANTHER OS02G0202900 PROTEIN 1 389 IPR045887 -
Pvu2g1797 389 SMART kelc_smart 251 296 IPR006652 GO:0005515
Pvu2g1797 389 SMART kelc_smart 152 202 IPR006652 GO:0005515
Pvu2g1797 389 SMART kelc_smart 203 250 IPR006652 GO:0005515
Pvu2g1797 389 PANTHER KELCH REPEAT F-BOX PROTEIN 1 389 - -
Pvu2g1797 389 SUPERFAMILY Kelch motif 103 350 IPR015915 GO:0005515
Pvu2g1797 389 Pfam F-box domain 55 92 IPR001810 GO:0005515
Pvu2g1797 389 Gene3D - 88 387 IPR015915 GO:0005515
Pvu2g1797 389 Pfam Kelch motif 191 236 IPR006652 GO:0005515
Pvu2g1797 389 Pfam Kelch motif 142 189 IPR006652 GO:0005515
Pvu2g1797 389 Pfam Kelch motif 240 284 IPR011498 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1797 Pvu-Chr2 32464122 32466285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1797 46 234 Miscellaneous Gene Families AT4G33900 28.571 7.91e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1797 - - gmx:100815474 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1797 2 32464122 32466285 Pvu2g1797 2 32464122 32466285 ECH
Pvu1g2689 1 51572715 51574884 Pvu2g1797 2 32464122 32466285 PCT