Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2689 ATGCCTTATTTTAGTGTTGGAAAGAAGAGATTTATCCAGCCAAATATGTGTTTCACTAATTTGACCAATCAAGATAAATCAACTCTTTCACAAAATGATAATTGTTTATTCCCTGATGCAATGAGTGAAGATTATAGCCCTATTCTACCCGGGTTGCCTGATGATGTGGCTGAGTATTGTCTGGCACTTGTGCCTCGTTCGAACTTCCCTGCTATGGGTGCTGTCTGTAAGAGATGGAGATCGTTTATGGGAAGCAAAGCATTCGCCACTGTGCGAAAATTGGCTGGAATGCTTGAGGAATGGCTATATTTCTTAACAACAGACTGTGAAGAAAAGGAAAGTCATTGGGAGGTTATGGATTGTCTCGGTCGTAAATGCCGATCTCTTCCACCAATGCCGGGTCTAGAAAAGGCTGGGTTTGGAGTGGTGGTTCTTAATGGAAAACTTCTTGTTATGGCTGGTTATTCAGCTATCGAAGGAACTACCTTTGCCTCAGCAGAGGTTTACCAATATGATTCTTGCCTCAACAGCTGGAGCAGATTGTCGAACATGAATGTGGCTCGTTATGACTTTGCTTGTGCTGAAGTGAATGGCCTGGTTTATGCTATTGGAGGCCATGGGGAGGATGGAGACAGTTTGTCCAGTGCTGAGATGTATGATCCAGAAACTGACAAGTGGACACTGATAGAGAGCCTTCGCCGTCCGAGATGGGGTTGTTTTGCTTGTGGATTTGAGGGTAAGCTCTATGTAATGGGTGGAAGGTCAAGCTTCACTATTGGAAACTCCAAGTTTGTTGATGTATACAACCCTGAGAGACACAGCTGGTGTGAGATTAAGAATGGCTGTGTGATGGTCACAGCTCATGCAGTAGTGGGAAAGAAGCTGTTCTGCATTGAGTGGAAGAATCAGCGGAAATTGGCTATATTCAGTCCAGAGGACAATTCATGGAAAATGGTACCAGTTCCATTGACAGGGAGCACAAGTGTTGGTTTTCGGTTTGGTATGCTGGATGAAAAGTTGCTGCTCTTCCCTCTGGTGGCAGAACATTCTTATCAAACATTGTTGTATGATCCAAATGCAGCTCTGGGGTCAGAGTGGAGGACTTCTGACATAAAACCATCTGGTTTGTGCTTGTCTTGTGTAACAATCAAGGCATGA 1158 0.4413 MPYFSVGKKRFIQPNMCFTNLTNQDKSTLSQNDNCLFPDAMSEDYSPILPGLPDDVAEYCLALVPRSNFPAMGAVCKRWRSFMGSKAFATVRKLAGMLEEWLYFLTTDCEEKESHWEVMDCLGRKCRSLPPMPGLEKAGFGVVVLNGKLLVMAGYSAIEGTTFASAEVYQYDSCLNSWSRLSNMNVARYDFACAEVNGLVYAIGGHGEDGDSLSSAEMYDPETDKWTLIESLRRPRWGCFACGFEGKLYVMGGRSSFTIGNSKFVDVYNPERHSWCEIKNGCVMVTAHAVVGKKLFCIEWKNQRKLAIFSPEDNSWKMVPVPLTGSTSVGFRFGMLDEKLLLFPLVAEHSYQTLLYDPNAALGSEWRTSDIKPSGLCLSCVTIKA* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2689 385 Gene3D - 86 376 IPR015915 GO:0005515
Pvu1g2689 385 SUPERFAMILY Kelch motif 99 343 IPR015915 GO:0005515
Pvu1g2689 385 PANTHER KELCH REPEAT F-BOX PROTEIN 1 385 - -
Pvu1g2689 385 Pfam Kelch motif 187 232 IPR006652 GO:0005515
Pvu1g2689 385 Pfam Kelch motif 138 185 IPR006652 GO:0005515
Pvu1g2689 385 SUPERFAMILY F-box domain 46 88 IPR036047 GO:0005515
Pvu1g2689 385 SMART kelc_smart 247 294 IPR006652 GO:0005515
Pvu1g2689 385 SMART kelc_smart 148 198 IPR006652 GO:0005515
Pvu1g2689 385 SMART kelc_smart 199 246 IPR006652 GO:0005515
Pvu1g2689 385 Pfam Kelch motif 236 279 IPR011498 GO:0005515
Pvu1g2689 385 PANTHER OS02G0202900 PROTEIN 1 385 IPR045887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2689 Pvu-Chr1 51572715 51574884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2689 52 230 Miscellaneous Gene Families AT4G33900 28.205 2.08e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2689 - - gmx:100802912 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2689 1 51572715 51574884 Pvu2g1797 2 32464122 32466285 PCT