Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1788 ATGGCCACCACCACAGAGAGGAATGTGGAGCACAAGGGTCTCGAAGAACTGAAACATCTTGGGTTTGTTAGGATTGCGGCCATTAAAGGCTTTGTGTGTATTTCGAATCTCTACGACTTCGCAAAGCAAAATTCAGGACCTTTGAGATCTGCTGTTGGAACCGTCGAAGATACTGTAACTACCGTTCTGGGTCCTGTCTACCACAAATTCAAGGGTGTACCAAACCGTCTTCTCCTTTTTGTGGACAATAAGGTGGATGAATCAACCCACAAATTCGATGAGCATGCACCTTCTTTAGTTAAACAAGTTGCAAGCCAAGTGAATTGCTTGGTCCAGGAAATGACAAACAAGGCAGAAAAAGTAGTGAGTGAGGCTCAATATGGAGGGGCACGAGCAGCAGCACAGTATGTTGCAACAGAGTCAAAGAAAATTGTGGTGTCTGGTTCGGTGAAATTGTGGGGTGGTCTGAACCACTATCCACCATTCCATGCAGTGGCAGAAATGGCAGTACCTAGTGCTGCACACTGGTCAGAAAAGTACAACAATGTGGTGAAGGGAATGAGTAAAAGGGGTGGTGGTGTGTTAGGGTATTTGCCCCTGATTCCAATTGATGACATAGCCAAGGCGTTTAAGCAGGGAGAAGGCAAACTGAATGAAGATGAAGCAGGTTCTGAGGGAGAGGATTCTTATTGA 693 0.4574 MATTTERNVEHKGLEELKHLGFVRIAAIKGFVCISNLYDFAKQNSGPLRSAVGTVEDTVTTVLGPVYHKFKGVPNRLLLFVDNKVDESTHKFDEHAPSLVKQVASQVNCLVQEMTNKAEKVVSEAQYGGARAAAQYVATESKKIVVSGSVKLWGGLNHYPPFHAVAEMAVPSAAHWSEKYNNVVKGMSKRGGGVLGYLPLIPIDDIAKAFKQGEGKLNEDEAGSEGEDSY* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1788 230 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 5 227 IPR008802 -
Pvu2g1788 230 Pfam Rubber elongation factor protein (REF) 15 212 IPR008802 -
Pvu2g1788 230 PANTHER RUBBER ELONGATION FACTOR-RELATED 5 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1788 Pvu-Chr2 32321715 32323442 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1788 - - gmx:100499806 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1788 2 32321715 32323442 Pvu2g1788 2 32321715 32323442 ECH
Pvu1g2701 1 51632896 51635108 Pvu2g1788 2 32321715 32323442 PCT