Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2701 ATGGCCAAGACCGAGTTGGAGGTAACGGTTGAGAGGAAGAACAAAGACCTAAAGCACTTGGGGTTTGTGAGGATTGCTGCTATTCAAACCTTTGTGTTTGTGTCAAATCTGTATGTGTACGCAAAGCAGAATTCTGGGCCTTTGAGATCTGCTGTTGGAACGGTGGAAAACACTGTAACCACCGTTCTTGGTCCTGTCTGCAACAAGTTCAAGGGCCTCCCTGATGATGTCCTGGTTTTTGTTGACAAAAAGGTGGATGAAGCTACACACAAGTTCGATGAGCATGCTCCTCCTGTTGCTAAGCACCTCGTGGATCAAGCCAAGGGTTTGATTCAGAAAGTGACAAACGAGGCAGGGAAAGTTGCTAGTGAAGCTCAATCTGGGGGGGCAAGAGCAGCTGTGCAATATGTGGCTACAGAGTCAAAGCATTTGGTGTTGATAAATTCAGTGAAGTTGTGGAATGGACTCAACCACTATCCACCATTCCATGCATTGGCAGAGATGGCAGTTCCCACTGCTGCTCACTGGTCAGAGAAGTACAACCATGTGATCAAGGCCATGACTCAAAAGGGTTACTGTTTCATTGGGTATCTACCGTTGATTCCCCTTGATGAGATTGCCAAGGCGTTCAAGCAGGGTCAGGGGAACTTGAAAGGAAATGATGCAACCTATGTTGAACAGAGCTCAGAATCATCATCTGATTCTGATTAA 711 0.4641 MAKTELEVTVERKNKDLKHLGFVRIAAIQTFVFVSNLYVYAKQNSGPLRSAVGTVENTVTTVLGPVCNKFKGLPDDVLVFVDKKVDEATHKFDEHAPPVAKHLVDQAKGLIQKVTNEAGKVASEAQSGGARAAVQYVATESKHLVLINSVKLWNGLNHYPPFHALAEMAVPTAAHWSEKYNHVIKAMTQKGYCFIGYLPLIPLDEIAKAFKQGQGNLKGNDATYVEQSSESSSDSD* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2701 236 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 1 236 IPR008802 -
Pvu1g2701 236 Pfam Rubber elongation factor protein (REF) 12 212 IPR008802 -
Pvu1g2701 236 PANTHER RUBBER ELONGATION FACTOR-RELATED 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2701 Pvu-Chr1 51632896 51635108 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2701 - - gmx:100816931 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2701 1 51632896 51635108 Pvu2g1788 2 32321715 32323442 PCT