Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1786 ATGAGAACAAGGAGAGGAGCCTGTTATCCTGGAGTAGTGTCAAGGATGTGTTCCGATGTCAGGCTTCCCAATAAAAACAAGGATCTGCACATGCATATGCGTATGCATGTTGCCGGAGACTCCTTTATTTATAGCCGGAAACGGCAGAAGAAGACGCCGGAAAAAACTGTTACCGATTTTGATTTTTTTGAGTCTTTACCGGATGACCTTGTAATCTCTATCTTCTGCAAGCTTAGTTCTACGGCCACTAAACCTTCCGATTTTCTCAATGTTTTAATTACGTGTAGGAGATTAAACAAGTTAGCACTCCATTCCCTTGTTTTGTCCAAAGTCTCTCCAAGAGCTTTCGCTATTAGAGCCAAAGATTGGTGCGATTCAGCGCACCGTTTCCTCAAGCACTGTGCCGATGCCGGAAATGTTGAAGCCTGTTACACTTTAGGCATGATTCGGTTTTACTGTCTCCAAAACCGAGGAAGCGGCGCGTCGTTAATGGCGAAGGCAGCGATAAACTCTCACGCGCGTGCTCTCTACTCACTCGCCGTGATTCAGTTCAACGGCAGTGGCGGAACAAAAAGCGACAAGGATTTACGCGCCGGCGTTGCGCTCTGCGCAAGAGCGGCGTTCCTCGGCCATGTCGACGCGCTGCGCGAGCTCGGTCACTGCCTGCAAGACGGTTACGGCGTGCGGCAGAACATCGCCGAGGGGCGGCGGTTCCTCGTGCAGGCCAACGCACGGGAGCTCGCGGCCGTATTGTCCACGAGCGCCGCCGCGCGCCACTGGCTGACGTGCAACCTTCAGCCACAGCTTCGGCAGGGGATCGGATGTCCGTTGCTCAGCGATTTCGGATGTAACGTGCCGACGCCGGAGGTTCATCCGGCGAGCCGGTTCATGGCAGAGTGGTTCGCCTCTCGCGGCGGTTCACCTGGACAGGGGCTGAGGTTGTGTTCGCACGCGGGGTGCGGGAGGCCGGAGTCGAGGAAGCACGAGTTTCGAAGGTGTTCTGTGTGTGGCGCGGTGAACTATTGCTCACGCGCGTGCCAAGCACTCGATTGGAAGTTCCGGCACAAGGCGGAGTGCGCCCCCGTAGAGCGGTGGCTCGACGAAGACGGCGAAGACGGTGGAGACGAGGATAGTGACGGAGAGGTTATGGCTATGGCGGATAGTTAG 1167 0.5561 MRTRRGACYPGVVSRMCSDVRLPNKNKDLHMHMRMHVAGDSFIYSRKRQKKTPEKTVTDFDFFESLPDDLVISIFCKLSSTATKPSDFLNVLITCRRLNKLALHSLVLSKVSPRAFAIRAKDWCDSAHRFLKHCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAINSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNIAEGRRFLVQANARELAAVLSTSAAARHWLTCNLQPQLRQGIGCPLLSDFGCNVPTPEVHPASRFMAEWFASRGGSPGQGLRLCSHAGCGRPESRKHEFRRCSVCGAVNYCSRACQALDWKFRHKAECAPVERWLDEDGEDGGDEDSDGEVMAMADS* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1786 388 SUPERFAMILY HCP-like 119 243 - -
Pvu2g1786 388 Gene3D - 307 363 - -
Pvu2g1786 388 Pfam MYND finger 319 359 IPR002893 -
Pvu2g1786 388 MobiDBLite consensus disorder prediction 366 388 - -
Pvu2g1786 388 SUPERFAMILY HIT/MYND zinc finger-like 314 364 - -
Pvu2g1786 388 SUPERFAMILY F-box domain 50 119 IPR036047 GO:0005515
Pvu2g1786 388 PANTHER MYND DOMAIN-CONTAINING 44 383 IPR044508 -
Pvu2g1786 388 ProSiteProfiles Zinc finger MYND-type profile. 317 359 IPR002893 -
Pvu2g1786 388 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 44 383 - -
Pvu2g1786 388 MobiDBLite consensus disorder prediction 368 388 - -
Pvu2g1786 388 Gene3D Tetratricopeptide repeat domain 107 262 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1786 Pvu-Chr2 32264391 32266185 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1786 - - gmx:100798174 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1786 2 32264391 32266185 Pvu2g1786 2 32264391 32266185 ECH
Pvu1g2702 1 51637374 51638914 Pvu2g1786 2 32264391 32266185 PCT