Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1783 ATGAAGGGTGAGATGTGGCTGTGGTTATGGGTCTTTGTATTGGGTGTGGGGGCGTTGGAGGAAGGACATTTGGCAGCGGAGTGCAACCTGCTGGTGCAGAAAGTGATTCCGTGTCTGAACTTTGCGACGGGGCAGGCGGCGGTTCCGACGAAGGAGTGCTGCGAGGCGACGTTGGAGATAAAGAAGAGCGATCCCAAGTGCCTGTGCTTCGCGATCCAGCAGACGCATAAGGGGATCCCTGAGGCCAAGAGCATGGGCATTCAAGAGGGTAGGCTCCTTCAGCTCCCTTCTGCTTGTAACTTGAAGAATGCCAGCACCACCAATTGTCCTACCATCTTCAGAAATGGTTCGTTGAAAATTAATTCGAGTTCAACGTTGGGAACTGCAATACCCCTCTCAGACACCCACAAGGCCTCCTTTGGAACCATGCTTCCACCTCCTCTCACGCCATACGTAGCTGCACTGCTTTGCGCCATTCTCCTTCTCCCCATTCCATTTTCTTCTCACAACATTAATTTAATGCTCATGCCTGCGTTTAACTAA 543 0.5175 MKGEMWLWLWVFVLGVGALEEGHLAAECNLLVQKVIPCLNFATGQAAVPTKECCEATLEIKKSDPKCLCFAIQQTHKGIPEAKSMGIQEGRLLQLPSACNLKNASTTNCPTIFRNGSLKINSSSTLGTAIPLSDTHKASFGTMLPPPLTPYVAALLCAILLLPIPFSSHNINLMLMPAFN* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1783 180 Pfam Probable lipid transfer 19 109 IPR016140 -
Pvu2g1783 180 Gene3D - 25 107 IPR036312 -
Pvu2g1783 180 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 9 116 IPR043325 -
Pvu2g1783 180 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 110 IPR036312 -
Pvu2g1783 180 CDD AAI_LTSS 37 101 - -
Pvu2g1783 180 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 1 9 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1783 Pvu-Chr2 32212999 32215673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1783 27 113 Acyl Lipid Metabolism Gene Families AT1G27950 55.172 2.14e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1783 - - gmx:100799403 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1783 2 32212999 32215673 Pvu2g1783 2 32212999 32215673 ECH
Pvu1g2708 1 51677293 51680383 Pvu2g1783 2 32212999 32215673 PCT