Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1779 ATGGATCCAGACACGTTGGCAAAGGCATTCGTAGAGCACTACTACTCAACCTTCGACACCAACCGCCCAAGCTTGGCCAATCTCTACCAGGATGCTTCCATGCTCACCTTTGAAGGCCAGAAGATCCAAGGCGCTTCCAACATCGTCGCCAAGCTCACTTCCCTCCCTTTCCAGCAGTGCCACCACACCATCTCCACCGTCGACTGCCAACCTTCCGGTGTCAACGGCGGCATGCTCGTCTTCGTCAGCGGCAACCTTCAGCTCGCCGGCGAACAGCACACTCTTAAATTCAGTCAGATGTTCCATTTGATGCCAACTCCGCAGGGAAGCTATTATGTATTGAATGACATATTCCGTTTGAACTATGCATGA 372 0.5242 MDPDTLAKAFVEHYYSTFDTNRPSLANLYQDASMLTFEGQKIQGASNIVAKLTSLPFQQCHHTISTVDCQPSGVNGGMLVFVSGNLQLAGEQHTLKFSQMFHLMPTPQGSYYVLNDIFRLNYA* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1779 123 Pfam Nuclear transport factor 2 (NTF2) domain 7 120 IPR002075 -
Pvu2g1779 123 CDD NTF2 2 122 IPR018222 -
Pvu2g1779 123 Gene3D - 1 123 - -
Pvu2g1779 123 PANTHER NUCLEAR TRANSPORT FACTOR 2B 1 123 - -
Pvu2g1779 123 PANTHER NUCLEAR TRANSPORT FACTOR 2 1 123 IPR045875 GO:0006913
Pvu2g1779 123 ProSiteProfiles Nuclear transport factor 2 domain profile. 6 120 IPR018222 -
Pvu2g1779 123 SUPERFAMILY NTF2-like 3 121 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1779 Pvu-Chr2 32105143 32107373 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1779 - - gmx:100777334 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1779 2 32105143 32107373 Pvu2g1779 2 32105143 32107373 ECH
Pvu1g2712 1 51706981 51708557 Pvu2g1779 2 32105143 32107373 PCT