Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2712 ATGGATCCAGACGCAGTGGCAAAGGCATTCGTGGAGCATTATTATTCCACCTTCGATGCCAACCGTAACAATCTGGCGAATCTGTATCAGGAAGGTTCCATGCTCTCCTTCGAAGGCCAGAAGATCCAAGGCTCCCACAACATCGTCGCCAAGCTCACTTCCCTTCCCTTCAACCAGTGCCAGCACTCCATCACCACCGTCGATTGCCAGCCCTCCGGCGTCAGCGCCGGCATGCTCGTCTTCGTCAGCGGCAACCTTCAGCTTGCCGGCGAACAGCACGCCCTCAAGTTCAGCCAGATGTTCCATTTGATGCCTACACCGCAGGGAAGCTATTATGTGTTGAATGACATATTTCGGTTGAACTATGCATGA 372 0.5349 MDPDAVAKAFVEHYYSTFDANRNNLANLYQEGSMLSFEGQKIQGSHNIVAKLTSLPFNQCQHSITTVDCQPSGVSAGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSYYVLNDIFRLNYA* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2712 123 ProSiteProfiles Nuclear transport factor 2 domain profile. 6 120 IPR018222 -
Pvu1g2712 123 Pfam Nuclear transport factor 2 (NTF2) domain 6 120 IPR002075 -
Pvu1g2712 123 Gene3D - 1 123 - -
Pvu1g2712 123 PANTHER NUCLEAR TRANSPORT FACTOR 2 1 123 IPR045875 GO:0006913
Pvu1g2712 123 CDD NTF2 2 122 IPR018222 -
Pvu1g2712 123 SUPERFAMILY NTF2-like 3 121 IPR032710 -
Pvu1g2712 123 PANTHER NUCLEAR TRANSPORT FACTOR 2-LIKE 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2712 Pvu-Chr1 51706981 51708557 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2712 - - gmx:100500395 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2712 1 51706981 51708557 Pvu2g1779 2 32105143 32107373 PCT