Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1719 ATGGCCGGCGCATCAGAAGAGGGACAAGTCATTGCCTGCCACACCGTTGAGGCATGGACCGAACAACTCCAAAAGGGCAATGATTCCAAGAAACTCATTGTTGTGGATTTTACTGCTTCTTGGTGTGGACCATGCCGTTTCATTTCTCCATTCTTGGCTGAGCTGGCTAAGAAGTTTACAAATGTCGTATTTCTGAAGGTGGATGTAGACGAATTGAAGAGTGTTGCTGAAGATTTTGCTGTTGAGGCAATGCCAACTTTTGTGTTTGTGAAAGAGGGAACTCTTCTGGGCAAAGTGGTGGGAGCAAAGAAGGAAGAATTGCAGCAGACAATAGAGAAACATGTGGCTGCATCTAGTGCTTAA 363 0.4545 MAGASEEGQVIACHTVEAWTEQLQKGNDSKKLIVVDFTASWCGPCRFISPFLAELAKKFTNVVFLKVDVDELKSVAEDFAVEAMPTFVFVKEGTLLGKVVGAKKEELQQTIEKHVAASSA* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1719 120 ProSiteProfiles Thioredoxin domain profile. 1 116 IPR013766 -
Pvu2g1719 120 SUPERFAMILY Thioredoxin-like 7 116 IPR036249 -
Pvu2g1719 120 Pfam Thioredoxin 11 113 IPR013766 -
Pvu2g1719 120 PANTHER THIOREDOXIN 5 117 - -
Pvu2g1719 120 PANTHER THIOREDOXIN 5 117 - -
Pvu2g1719 120 ProSitePatterns Thioredoxin family active site. 34 52 IPR017937 -
Pvu2g1719 120 CDD TRX_family 21 112 - -
Pvu2g1719 120 Gene3D Glutaredoxin 2 119 - -
Pvu2g1719 120 PRINTS Thioredoxin family signature 33 41 - -
Pvu2g1719 120 PRINTS Thioredoxin family signature 41 50 - -
Pvu2g1719 120 PRINTS Thioredoxin family signature 80 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1719 Pvu-Chr2 30934887 30937288 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1719 K03671 - gmx:100499701 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1719 2 30934887 30937288 Pvu2g1719 2 30934887 30937288 ECH
Pvu2g1719 2 30934887 30937288 Pvu1g2725 1 51780288 51783180 PCT