Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1645 CTTGCTTCGGACTTGGTTCAGCATTGGTTAGCGAATAATCCAGGAGCTTCCATTTGCACACAAGAAGGAGTGCGTGCTTTCAAGGCCATTGCTAACTTTCAGGATTATCATGGTCTGCCGGAGTTCAGAAATGCAGTGGCTAAATTCATGGGAAGAACGAGAGGAAATAGAGTAACGTTTGACCCTGAGCGTATTGTTATGAGCAGTGGAGCAACAGGAGCACACGAGGTCACTGCGTTTTGTTTGGCAGATCCCGGCGATGCATTTTTGGTTCCCACACCCTATTATGCAGGTTTCGACAGGGATTTGAGGTGGAGAACGGGGGTTAAACTTGTTCCAGTTATATGCGAAAGCTCGAACGATTTCAAGTTGACAAGGAAAGCGTTGGAAGAGGCGTACGAGAAAGCCAAAGAGAAGAACATCAGAATAAAGGGGTTACTAATTACCACTCCATCAAACCCACTGGGAACTGTCATGGACCGACAAACTCTAAGAACAGTGCTGGGTTTTATCAACGAAAAACACATCCACCTAGTAAGCGACGAAATATACGCAGGTACAGTTTTTTGCTACCCTGGATTCACGAGCATCGCGGAGGTAGTAGAGGAAGACAAGGACATAGAATGCGACCGTGACCTTGTCCACATTGTTTACAGTCTTTCCAAGGACATGGGGTTCCCTGGTTTCAGGGTTGGCATCATTTACTCTTACAACGACGCAGTCGTCACTTGCGCTCGCAAAATGTCTAGCTTTGGGTTAGTGTCCACGCAGACACAACATCTCATTGCATCAATGCTTTCTGATGATGAGTTTGTGAAAGGGTTTCTGGAAGAGAGTGCAAAAAGGCTTGCGCAAAGGTATGGGGTTCTTTGCAGGGGTCTTGGGCAAGTTGGCATAAAGTGCTTGGCGAGCAGTGGTGGACTCTTTCTGTGGATGGATTTGCGTGGTCTTTTGAAGAAGGCAACGTTTGAGGCGGAAATGGAACTGTGGAGAGTGATCGTTCAGCAAGTGAAGATCAATATTTCCCCTGGCTCCTCCTTTCACTGCTCTGAGCCAGGGTGGTTCAGGGTGTGCTATGCCAACATGGATGCTAGAGCCGTGGAGGTTTCTCTGGCGAGAATGCGCATCTTCGTTCATCAGAACACCGAAGCCAGGAAGAAATCTTGCAGCTATAGAAAGTTGAGGCTAAGCTTCTCATCCAGAAGGTTGGATGAGTTTTTGGTGTCACCTCACTCACCTTTTTCTCAGTCACCTCTAGTTAAAGCCTACACTTGA 1275 0.4729 LASDLVQHWLANNPGASICTQEGVRAFKAIANFQDYHGLPEFRNAVAKFMGRTRGNRVTFDPERIVMSSGATGAHEVTAFCLADPGDAFLVPTPYYAGFDRDLRWRTGVKLVPVICESSNDFKLTRKALEEAYEKAKEKNIRIKGLLITTPSNPLGTVMDRQTLRTVLGFINEKHIHLVSDEIYAGTVFCYPGFTSIAEVVEEDKDIECDRDLVHIVYSLSKDMGFPGFRVGIIYSYNDAVVTCARKMSSFGLVSTQTQHLIASMLSDDEFVKGFLEESAKRLAQRYGVLCRGLGQVGIKCLASSGGLFLWMDLRGLLKKATFEAEMELWRVIVQQVKINISPGSSFHCSEPGWFRVCYANMDARAVEVSLARMRIFVHQNTEARKKSCSYRKLRLSFSSRRLDEFLVSPHSPFSQSPLVKAYT* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1645 424 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 6 1 389 - -
Pvu2g1645 424 Coils Coil 119 146 - -
Pvu2g1645 424 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 219 232 IPR004838 GO:0003824|GO:0009058|GO:0030170
Pvu2g1645 424 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 27 43 - -
Pvu2g1645 424 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 64 84 - -
Pvu2g1645 424 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 86 107 - -
Pvu2g1645 424 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 140 164 - -
Pvu2g1645 424 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 176 199 - -
Pvu2g1645 424 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 213 237 - -
Pvu2g1645 424 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 245 268 - -
Pvu2g1645 424 CDD AAT_like 32 375 - -
Pvu2g1645 424 Gene3D - 14 268 IPR015421 GO:0003824
Pvu2g1645 424 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 1 389 - -
Pvu2g1645 424 Gene3D Aspartate Aminotransferase, domain 1 1 373 IPR015422 GO:0003824
Pvu2g1645 424 Pfam Aminotransferase class I and II 21 370 IPR004839 GO:0009058|GO:0030170
Pvu2g1645 424 SUPERFAMILY PLP-dependent transferases 7 377 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1645 Pvu-Chr2 30179231 30181098 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1645 K20772 - gmx:100793020 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1645 2 30179231 30181098 Pvu2g1645 2 30179231 30181098 ECH
Pvu2g1645 2 30179231 30181098 Pvu2g3016 2 45641803 45644641 PCT