Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1220 ATGATGGAGGTTGTGATTGTTGCACTTGCGGCTACAATTGGGAATCTTCTGATGGGATGGGATAGTTCAACTATTGCAGCTGGTATGACTTACATCAAGAAGGACTTCATTTTAGATGCGACAATTGAAGGGCTAATTGTGTCCATGTCGTTTATAACCGGTACTGTTGTGACAATATTCTCTGGGGCAGTGTCTGATATGGTTGGAAGACGCCCTATGCTGATAACATCTTCGGTTATGTTTTTCCTAAGTGGTTTGATAATGTTTTGGGCTCCTAATGTTGCTGTTATTCTGGTAGCGAGGATAGTGAATGGGGTTGCCATTGCTCTGGCTGTTACTCTTAATCCTCTCTACATATCTGAGGTAGCACCGGCCGATATCAGAGGCCAATTGAACACTTTTACTCAGTTTGCTTGCTCTGGTGGAATGTTGTTGGCTTACATTATGGTGTTCTCAATGTCCTTGACTGACTCACCAAGTTGGAGACTCATGCTTGGAGTTATTTCAATTCCTGCTGTTGCCTACATTTTACTCGCTGTGTTTTACCTGCCTGAGTCTCCAAGATGGCTTGTGAGCAAAGGCCGGCTACTTGAGGCTGAAAGAGTTCTGAAAAGGCTTCGCGGCACAGATGATGTTTCAGGGGAATTGGCGTCGCTGGCTGAGGGTCTCAGCCCTGGGGGTGAAGCCACTTCCATAGAAGAGTATGTAGTTGCCCCAGCCAGCGAGATTCTTGTTAACCAGGAAGCAGGGAAAGATTATATAAAATTATATGGTCCCAATGAGGGTGTTACAATGGTTGCTCAACCAGTGAATGGACAGGGTAGTTTTATATCCCGTAGTATGTTGTCTCAGCAAGGAAGCTTTGGAGCTCTCACAAGTACTGGTCTTAAGGATCCTATTGTCACTCTCTTCGGAAGTATGCATGAGCATACTCTCCCTGAGAGTGGAGGTTCACGCAGCATGCTAATTCATAATGCCAACAGTATCTTTAGCATGGGAGAGCCAGAGTCCAGTCCCTTTGGTACCAGTGACAACCTGCATGCACCGCTGATGTCATTTCAAGGGGGTGGTGGTGAAAGGGCTTACGAATCCAAGGACATGTTGGGTATGAGGAGCAATAGCAGCCTGAGAAGCAATAGTAGTTTGGCTCATGGGAGTGCGGTTGAAACTCCTAAAAATACAAACATTGGTGGAGGTTGGCAGTTGGTTTATAAATCAGCTGATGGTGTTGGGGGTGGGAAAAGAGAAGGGCTCCAAAGGGTTTATTTGCATGCAGAACCTTCCGCAGTATCTCACTCTCAGCATGTTTCATCATTTGTTTCAACTTCTGGCTATGACATACCAATAGATGGTGGTGAAGCGTATCAAGCTGCTGCTCTTGTCAGTCAGTCAGTTCTAGGAACTCATGATTTGTTGCATCTGCCAGAAGTTGCTGCAAAAGGCTCAAAATGGAGAGCTCTGCTAGAACCAGGAGTCAAGCGTGCATTAGTTGTTGGCATAGGACTTCAAGTTCTTCAACAGGCTGCTGGCATAAATGGGTTTCTGTACTATGCTCCCCAGATTCTTGAGCAGGCAGAAATAGGAGCTCTTTTATCAAATTTGGGCCTTAGTTCAGCATCTGCTTCTTTTCTTGTAAATATCATTACAACATTCTGTATGCTTCCTTGTATAGCTCTTGCAATAAGACTCATGGATATTTCTGGCAGGAGGTCAATCATGCTGTATACAGTACCCATTTTGATAGTTTGTCTCCTGGCACTAATAATCAAGCAGTTCTTGGAACTAAATTCTGTCATCAATGCTGCAATCACTTCTATTAGTGTTGTGGTTTATGAAAGCGTCTTCTGCATGGGCATTGGCGTTATTCCAAACATCATATGTGCTGAAATCTTTCCAACAAGTGTTCGTGGAATCTGCATTTCCCTGACTTCTCTCACATATTGGGGTTGTACCTTGATTATCACCTTAATATTCCCCACCTTGCTCCAGCTTCTCGGTCTCCCTGGTGTCTTTGGATTATTTGTTGTTGGCTGCATCATTTCATGGATATTTGTCTACGTGAAAGTTCCTGAAACGAAAGGCATGCCTTTAGAAGTTATTACTGAATTTTTTGCTATTGGTGCAAAGCCTGGTACTGATCCTGCAGCAATTGGAATCAAATAG 2163 0.4411 MMEVVIVALAATIGNLLMGWDSSTIAAGMTYIKKDFILDATIEGLIVSMSFITGTVVTIFSGAVSDMVGRRPMLITSSVMFFLSGLIMFWAPNVAVILVARIVNGVAIALAVTLNPLYISEVAPADIRGQLNTFTQFACSGGMLLAYIMVFSMSLTDSPSWRLMLGVISIPAVAYILLAVFYLPESPRWLVSKGRLLEAERVLKRLRGTDDVSGELASLAEGLSPGGEATSIEEYVVAPASEILVNQEAGKDYIKLYGPNEGVTMVAQPVNGQGSFISRSMLSQQGSFGALTSTGLKDPIVTLFGSMHEHTLPESGGSRSMLIHNANSIFSMGEPESSPFGTSDNLHAPLMSFQGGGGERAYESKDMLGMRSNSSLRSNSSLAHGSAVETPKNTNIGGGWQLVYKSADGVGGGKREGLQRVYLHAEPSAVSHSQHVSSFVSTSGYDIPIDGGEAYQAAALVSQSVLGTHDLLHLPEVAAKGSKWRALLEPGVKRALVVGIGLQVLQQAAGINGFLYYAPQILEQAEIGALLSNLGLSSASASFLVNIITTFCMLPCIALAIRLMDISGRRSIMLYTVPILIVCLLALIIKQFLELNSVINAAITSISVVVYESVFCMGIGVIPNIICAEIFPTSVRGICISLTSLTYWGCTLIITLIFPTLLQLLGLPGVFGLFVVGCIISWIFVYVKVPETKGMPLEVITEFFAIGAKPGTDPAAIGIK* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1220 720 ProSitePatterns Sugar transport proteins signature 1. 61 78 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu2g1220 720 Gene3D MFS general substrate transporter like domains 466 706 IPR036259 -
Pvu2g1220 720 Pfam Sugar (and other) transporter 7 224 IPR005828 GO:0016021|GO:0022857|GO:0055085
Pvu2g1220 720 Pfam Sugar (and other) transporter 481 704 IPR005828 GO:0016021|GO:0022857|GO:0055085
Pvu2g1220 720 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 693 IPR020846 GO:0022857
Pvu2g1220 720 SUPERFAMILY MFS general substrate transporter 7 698 IPR036259 -
Pvu2g1220 720 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu2g1220 720 PRINTS Sugar transporter signature 98 117 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu2g1220 720 PRINTS Sugar transporter signature 506 516 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu2g1220 720 PRINTS Sugar transporter signature 605 626 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu2g1220 720 PRINTS Sugar transporter signature 628 640 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu2g1220 720 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 1 717 - -
Pvu2g1220 720 PANTHER - 1 717 - -
Pvu2g1220 720 Gene3D MFS general substrate transporter like domains 2 246 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1220 Pvu-Chr2 23927092 23931421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1220 49 709 Organic Solute Cotransporters AT3G51490 52.168 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1220 - - gmx:100789093 1197.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1220 2 23927092 23931421 Pvu2g1220 2 23927092 23931421 ECH
Pvu9g1186 9 17298710 17304455 Pvu2g1220 2 23927092 23931421 ECH
Pvu3g2794 3 49758785 49761900 Pvu2g1220 2 23927092 23931421 ECH
Pvu2g1220 2 23927092 23931421 Pvu3g2794 3 49758785 49761900 PCT