Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0793 ATGAAGATGAAATCAAACCTTTCTGCTTTCCTATTGTTGTTCCTTCTCCTAGTCGGCCAATCCCTTTGCGCCAAGGCTGGTTTTCCTCCTCTTAAAAACTCCATGCTGAAGTGGCTAAAAAGGGGGAAAAAACCACCCAAGCCAGAATGGGATAGTGAAATCTATGACTTTCTCAGACAAAAGTCTTCTCCTCCACAACAAAACCAACCAACGAAAGGCTTGTCTCGAATCAAAGACTACTTTTCTAACTTTGGCTACCTTCAATCCTCTGGGCCATTCGACGATTATTGGGACCTCCAAACAGTATCAGCCATCAAGACCTTCCAACGCTCTTTCCATCTCCAAGTTACCGGCACCGTAAACAACCAGACCATTCAACTAATCTCGCGACCACGATGCGCTGTCCCCGACATGGATTTTAACTACAACTTCACCGACAACGTCTCGTGGCCCAAAGCCGGTCCCCAGTGGTTCCAAAAGAGAAACCTCACCTACGGTTTTCTTCCGGCAAGTGAAATCCCAGCCAACGCCACGAAAGTTTTCAGAGATGCATTCGCGCGGTGGGTGAATGCCACAGGGTTTTTTAACCTCACGGAGACAACCTACGATGACGCGGACATTAAGGTAGGATTCTACACTTTCACTGAAGGCGTTGATGACGACTTGTTTGGCTTAAGCTTTATAAGGGAGAAACCTCCGTCTAACAAGAAGACAGCGGAGATACGTCTGAACGGGAACATGTACTGGGCGCTGCCCAGTGAAAATGATAGCTTGTCTTGGGAGGATGGAATTCTGGACTTGGAGAGTGTGGCGATACACGAGATAGGACATTTACTTGGACTTGACCACTCTTTCATGAATGAGTCTGTTATGTACCCTTACGTATTGTCATCACAGCAACGAAAGATAGAACTCTCCAATTCTGACAAGAACAACATTCTGCAACAACATAGTGGTGCCAAGTCTGGTTATTGTGGAAGTTGGGAAGTGCTAGTAATTACCACCTTGTCTCTGGGATTTGGTTATATGGTGCTTCTAGCTTGA 1044 0.4617 MKMKSNLSAFLLLFLLLVGQSLCAKAGFPPLKNSMLKWLKRGKKPPKPEWDSEIYDFLRQKSSPPQQNQPTKGLSRIKDYFSNFGYLQSSGPFDDYWDLQTVSAIKTFQRSFHLQVTGTVNNQTIQLISRPRCAVPDMDFNYNFTDNVSWPKAGPQWFQKRNLTYGFLPASEIPANATKVFRDAFARWVNATGFFNLTETTYDDADIKVGFYTFTEGVDDDLFGLSFIREKPPSNKKTAEIRLNGNMYWALPSENDSLSWEDGILDLESVAIHEIGHLLGLDHSFMNESVMYPYVLSSQQRKIELSNSDKNNILQQHSGAKSGYCGSWEVLVITTLSLGFGYMVLLA* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0793 347 Pfam Matrixin 157 315 IPR001818 GO:0004222|GO:0006508|GO:0008270|GO:0031012
Pvu2g0793 347 PANTHER MATRIXIN PROTEIN 68 321 - -
Pvu2g0793 347 SUPERFAMILY PGBD-like 65 138 IPR036365 -
Pvu2g0793 347 PRINTS Matrixin signature 128 141 IPR021190 GO:0004222|GO:0006508|GO:0008270
Pvu2g0793 347 PRINTS Matrixin signature 270 295 IPR021190 GO:0004222|GO:0006508|GO:0008270
Pvu2g0793 347 PANTHER MATRIX METALLOPROTEINASE 68 321 - -
Pvu2g0793 347 SMART col_5 153 320 IPR006026 GO:0006508|GO:0008237|GO:0008270
Pvu2g0793 347 Gene3D Collagenase (Catalytic Domain) 63 319 IPR024079 GO:0008237
Pvu2g0793 347 Pfam Putative peptidoglycan binding domain 75 127 IPR002477 -
Pvu2g0793 347 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 125 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0793 Pvu-Chr2 11373048 11374448 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0793 - - gmx:100779298 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0793 2 11373048 11374448 Pvu3g0577 3 7115837 7117359 PCT