Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0681 ATGTCTACCGTTGCATCAGAACCTCTCTTACACCTTTGCTCCAGAAAACCTTCATTTCATAGCCATAAACCAATCCCTCTGAGACCCTTCTTTCTTCCCACGTGCTCCTCTAATCTCAATGATGCATCTGTCATCTTCCACCAACCTCGTAGGACTCTCTCTCCCGTGCATGCAGTTTCACTTGCAGACACACCTACCCTCCATCCCCTTCAATGCCCTCAGACCATCACCCACACTTTCGAAATCGACCGAACCCAAACGGCGGTGGGAAAGATTTTTGTGAGATTAGATCACGGAAAAGATTTGAAGGATTGGGAGCTTACGGTGCGCTGCAGTCTACCTGGAAAATGGATTCTTCACTGGGGAGTTACCCATGTTGATGATGTTGGAAGGGAATGGGATCAACCTCCTCTTGATATGATACCCCCTGGATCTGTTCCTATAAAGGACTATGCAATAGAGACCCCTTTGAAGAAGTCAGCCTTATCTGCAGAAGGAGATACGCTTCCTGAAATCAGGATTGATCTTAAAGCCAAATTTGGAATTTCAGCAATTCATTTTGTTCTCAAGGATGAGGAAACTGGAGATTGGTACAAAAACAAAAGTAGAGATTTCGTGGTTTCTTTGGTCGACTACATTAGGGCAGATTCAGATACAAGTATAATTGAACCTAAAAGAGGCTTTGATTTTTGGCCAGGGAATTTGGGGCAAATATCTAAAATCTTCTCCAAGTCAAAAGCTGACGAAAATGAAAGCAGTGAATCCAGAGTTCCAGAACGAGAAAGCAATCAACCAGACGGTTTCTATGAGGAAGTGTATGTAACAAAGAAGGTTTTAATTAGTAACTCTGTCACTGTCTCCACCAAGAAATGCTTTGAGTCTGGGGCAGTGAAGGACATTTTATATGTTGAAACTGATCTTCCTGGAGATGTTGTGCTTCACTGGGGAGTTTGTAGGAATGATACAAAAAGGTGGGAAGTTCCTCGTTCTCCTTATCCACCAGGCACAGTACCATTTAAAGAGAGAGCTTTGAGAACTCCATTATGGCCAAGCCCTGATGGAAAAGGATCTTCAGCACAAATCACTTTAGAAGAAGAATTTTCAGGATTTGTTTTTGTACTCAAGCAAAATAAAGATACTTGGTTCAAGTACTTGGGAAATGACTTTTATGTTCCTCTCTCAAGTCCTATCAAATTGCTTAATAGTAGCAGCAAAGATGATCTGTCAGAAGGAGTGCAGATTGAAAAGCCTAGTCAGGAGAATTCTTTCTTTGCATTTACTGATACAGTGGCCTATGAAATGAGAAATTTGGTCTCAGACAATTCCTCTGATAAGAATCAAAAGAAGAAATCTAAAAAGGTGCAACAAAGCATTTTTGAAGAAATTGAAAGGCTGGCTGCTGAAGCCTATAATATATTCAGAAGCTCCATTCCAAGTTTCTCTAAGCCAACTACTGCAAAACCGGAAGCAACCAATGTGGAACCTGAGACAACTATTGTTGTACCAGAGGCTTCAGTGGAATCAGAGGCACTGTCCCTGGAGCCAAAAATATGCTCAGGGACAGGCACAGGGCATGAAATATTATGCCAAGGGTTTAACTGGGAATCTAATGTATCTGGAAGATGGTACATGAAGCTTAAAGAGATAGCTTCTGAACTAGCATCAATTGGTTTCACTGTGGTCTGGTTACCACCACCTACAGAGTCTGTTTCACCTGAAGGATACATGCCGAAGGATTTATATAATTTAAATTCCAGATATGGAAACATAGATGAACTCAAAGATTTGGTGAAAAGATTTCATGAAGTTGGGATCAAAGTTCTAGGAGATGCTGTTTTAAATCACCGCTGTGCACATTATCAGAATAAGAATGGTGTTTGGAACATATTTGGAGGCTGTCTTGACTGGGATGATCGTGCAGTTGTTTCAGATGATCCACATTTTCAGGGTAGGGGCAACACGAGTAGTGGAGATAGTTTTCATGCTGCTCCAAACATTGATCATTCGCAGGAGTTTGTGAGAAAAGATCTCAAAGAATGGTTATGCTGGTTGAGGAAAGAAATTGGATATGATGGATGGAGGCTTGACTTTGTCAGAGGATTTTGGGGTGGTTATGTAAAGGACTACATAGAGGCAAGTGAACCTTATTTTGCTGTGGGAGAGTACTGGGATTCCCTCAGTTATAGAAATGATGAAACTGATTATAATCAAGATGCTCATAGGCAAAGGATAGTTGACTGGATCAATGCCACTAAAGGTACCTCTGGTGCATTTGATGTTACAACAAAAGGGATTCTTCACGCTGCACTGGAAAAATGTGAATATTGGCGATTGTCAGATGAGAACGGAAATCCTCCAGGTGTTATTGGATGGTGGCCTTCTCGGGCTGTTACCTTTATAGAGAACCATGACACTGGTTCTACTCAGGGTCATTGGAGATTTCCCAGTGGAAAAGAAATGATAGGATATGCTTACATTCTTACTCACCCTGGAACCCCATCAATCTTTTATGACCATATTTTCTCTCGCTACAAAACTGAAATAGCAAGTCTGATATCTCTCAGAAGGAGGAACGGGATCCACTGCAGGAGTACAGTTCAAATTAGCAAAGCAGAAAGGGATGTTTATGCAGCCATCATTGATGAAAAAGTTGCTATGAAGATCGGACCAGGACATTTTGAGCCACCAAGTGGCTCCCTGAAATGGTCATTAGCTATTGAGGGAAAACACTATGAGATTTGGGAAGCATCATAA 2754 0.415 MSTVASEPLLHLCSRKPSFHSHKPIPLRPFFLPTCSSNLNDASVIFHQPRRTLSPVHAVSLADTPTLHPLQCPQTITHTFEIDRTQTAVGKIFVRLDHGKDLKDWELTVRCSLPGKWILHWGVTHVDDVGREWDQPPLDMIPPGSVPIKDYAIETPLKKSALSAEGDTLPEIRIDLKAKFGISAIHFVLKDEETGDWYKNKSRDFVVSLVDYIRADSDTSIIEPKRGFDFWPGNLGQISKIFSKSKADENESSESRVPERESNQPDGFYEEVYVTKKVLISNSVTVSTKKCFESGAVKDILYVETDLPGDVVLHWGVCRNDTKRWEVPRSPYPPGTVPFKERALRTPLWPSPDGKGSSAQITLEEEFSGFVFVLKQNKDTWFKYLGNDFYVPLSSPIKLLNSSSKDDLSEGVQIEKPSQENSFFAFTDTVAYEMRNLVSDNSSDKNQKKKSKKVQQSIFEEIERLAAEAYNIFRSSIPSFSKPTTAKPEATNVEPETTIVVPEASVESEALSLEPKICSGTGTGHEILCQGFNWESNVSGRWYMKLKEIASELASIGFTVVWLPPPTESVSPEGYMPKDLYNLNSRYGNIDELKDLVKRFHEVGIKVLGDAVLNHRCAHYQNKNGVWNIFGGCLDWDDRAVVSDDPHFQGRGNTSSGDSFHAAPNIDHSQEFVRKDLKEWLCWLRKEIGYDGWRLDFVRGFWGGYVKDYIEASEPYFAVGEYWDSLSYRNDETDYNQDAHRQRIVDWINATKGTSGAFDVTTKGILHAALEKCEYWRLSDENGNPPGVIGWWPSRAVTFIENHDTGSTQGHWRFPSGKEMIGYAYILTHPGTPSIFYDHIFSRYKTEIASLISLRRRNGIHCRSTVQISKAERDVYAAIIDEKVAMKIGPGHFEPPSGSLKWSLAIEGKHYEIWEAS* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0681 917 PANTHER ALPHA-AMYLASE 81 917 - -
Pvu2g0681 917 MobiDBLite consensus disorder prediction 244 264 - -
Pvu2g0681 917 CDD AmyAc_arch_bac_plant_AmyA 527 866 - -
Pvu2g0681 917 SMART alpha-amyl_c2 856 916 IPR012850 GO:0004556|GO:0005509|GO:0005975
Pvu2g0681 917 Pfam Alpha amylase, catalytic domain 553 837 IPR006047 GO:0005975
Pvu2g0681 917 PANTHER ALPHA-AMYLASE 3, CHLOROPLASTIC 81 917 - -
Pvu2g0681 917 Pfam Alpha-amylase C-terminal beta-sheet domain 857 915 IPR012850 GO:0004556|GO:0005509|GO:0005975
Pvu2g0681 917 Gene3D - 860 916 IPR013780 -
Pvu2g0681 917 Gene3D Glycosidases 526 859 - -
Pvu2g0681 917 SUPERFAMILY Glycosyl hydrolase domain 860 915 - -
Pvu2g0681 917 SMART aamy 526 855 IPR006047 GO:0005975
Pvu2g0681 917 SUPERFAMILY (Trans)glycosidases 527 843 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0681 Pvu-Chr2 7612419 7619229 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0681 1 917 Glycoside Hydrolase AT1G69830 59.700 0.0 1096
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0681 K01176 - gmx:100810333 1475.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0681 2 7612419 7619229 Pvu2g0681 2 7612419 7619229 ECH
Pvu3g0714 3 10231216 10244012 Pvu2g0681 2 7612419 7619229 PCT