Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0027 ATGGCTGTTCAAGCTCAATACCCCTCCAATGTACTCTTCCTAAACTGCAGCAGCAAAAGTGGAAAAGAACCGCATGACTATTCTTTGCCGGGAGAACTCCTTGATCATAATCAATCTCCTATGTTGTTCAACAACGGAGATAGTAATTCTCGAAAGAGAGGAAGAGAAGGAACAGGAGCTAAGGCCATTGGGCCAAACCTTGTGAATTCGTTCTCTTTACAATCACAATCACCGCAGCTCATAGAACTCACTCAACTTCATAATCAAAATGTAGTCTCCACGGGGCTGGGGTTATCCTTTGGTGACCAACAGCAAAGACAACAACTACATCATCACCAACAACAACAACATGGGTGTCACTCCTCTTCTTTCCTATCTCTATTATCGGATGGTTTGACCTCGCAAATCAAACAACAGCATGACGAAATTGACCAATTCCTTCAAGCCCAGGGCGAGCAATTGCGGCGGGCATTAGCGGAGAAGAGAGGGAGACATTATCGGACGCTGCTAAGGGCAGCGGAGGAATCAGTGTTGCGGCGGCTGAGGGAGAAGGAAGCGGAGGTAGAGAAGGCGACGAGGCGCAACGCGGAGTTGGAGGCACGCGCGGCGCAGCTTGGCTTGGAGACCCAGCTTTGGCAGGCCAAGGCGAAGGCGCAGGAAGCGACGGCGGTGTCGTTGCAGGCGCAGCTGCAGCAGGCCATTATGAGCGGCGGCGAGGACGGCGCGGCGGGAGGGCTGTCATGTGCCGGGGGCGAGGCGGAGGATGCTGAGTCAGCATATGTTGACCCGGAGCGAGTTGGTCCGAAATGCAGAGGGTGCGCTAAACGGGTGGCTACGGTGGTGGTTTTGCCGTGTCGCCACCTATGCATCTGCGCTCAGTGCAACACACATTTTCGGGCATGTCCAGTTTGTCTCACCGTTAAAAATTCAACCGTTCAAGTCTATCTATCTTAA 954 0.5273 MAVQAQYPSNVLFLNCSSKSGKEPHDYSLPGELLDHNQSPMLFNNGDSNSRKRGREGTGAKAIGPNLVNSFSLQSQSPQLIELTQLHNQNVVSTGLGLSFGDQQQRQQLHHHQQQQHGCHSSSFLSLLSDGLTSQIKQQHDEIDQFLQAQGEQLRRALAEKRGRHYRTLLRAAEESVLRRLREKEAEVEKATRRNAELEARAAQLGLETQLWQAKAKAQEATAVSLQAQLQQAIMSGGEDGAAGGLSCAGGEAEDAESAYVDPERVGPKCRGCAKRVATVVVLPCRHLCICAQCNTHFRACPVCLTVKNSTVQVYLS* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0027 317 Coils Coil 171 208 - -
Pvu2g0027 317 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 316 IPR017066 -
Pvu2g0027 317 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 1-LIKE 1 316 - -
Pvu2g0027 317 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 251 317 IPR013083 -
Pvu2g0027 317 MobiDBLite consensus disorder prediction 24 63 - -
Pvu2g0027 317 PIRSF SBP1_RNase_bind 1 317 IPR017066 -
Pvu2g0027 317 ProSiteProfiles Zinc finger RING-type profile. 270 304 IPR001841 -
Pvu2g0027 317 Pfam Zinc finger, C3HC4 type (RING finger) 269 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0027 Pvu-Chr2 270280 271875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0027 270 306 Miscellaneous Gene Families AT4G39050 37.838 7.01e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0027 K19042 - gmx:100779548 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0027 2 270280 271875 Pvu2g0027 2 270280 271875 ECH
Pvu2g0027 2 270280 271875 Pvu3g2338 3 44699656 44701692 PCT