Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2370 ATGCCTCCACTCTTCTTCTTCTTCTTCTTCCTCTTCCTTTCTCTTCTCTTTTCTCCACTCCTCTCCCTGCAACTCAACCACACCTCATTCTCACTCTCTTTTCCTCTCACCTCACTCCCTCTCTCCACCAACACCGCCTCCAAGATGCTGCGCGACTCTCTCATTGCCTACTCAAACCGCACCACAAACCACACGCGACTCACTTCGCCTTCTTCTCCATATAACTACAGGCTCACCTTCAAATACTCCATGGTTTTAATCGTCAACCTTCCCATTGGGACCCCACCGCAGGTTCAGCCTATGTTGTTGGACACCGGAAGCCAACTCTCGTGGATTCAGTGTCACCGAAAACCACCCAAGGTGCCTCCCCCAACCGCCTCCTTTGACCCTTCTCTCTCCTCCACTTTCTCCATTCTTCCCTGTACTCACCCCGTTTGCAAACCACGAATTCCCGATTTTACTCTCCCCACTTCCTGCGACCAGAACCGCCTCTGTCACTACTCCTACTTCTACGCCGACGGTACCTACGCCGAGGGAAATCTCGTCAGAGAAAAGTTCACTTTCTCCCGTTCCCTTTTTACCCCTCCTCTCATCCTCGGCTGCGCCACGGAGTCCACCGACCCCAGGGGCATTTTGGGAATGAACCGTGGACGCCTCTCCTTCGCTTCACAATCCAAAATTACCAAATTCTCCTATTGCGTCCCCACCCGAGAAACCCGACCCGGCTCCACTTCATCCGGTTCCTTCTACCTTGGCCACAACCCGAACTCTCTCCGGTTTAAGTTTGTCCAAATGTTGACTTTTACTCAGAGTCAACGCATGCCAAATCTTGACCCCTTGGCTTATACTGTCGCCTTGCTGGGGATAAGAATCGGGGGCAGAAAATTGAATATCTCCCCGGCGGTTTTTCGTGCTGACGCTGGCGGGTCGGGTCAAACTATGATTGACTCCGGATCCGATTTTACTTACCTTGTTAACGAGGCTTATGATAAGGTGCGGGCGCAAGTAGTGAGAGCTGTGGGGCCCAGGATGAAGAAGGATTACGTGTACTCTGGCGTTGCGGACATGTGTTTCGATGGGAACGCGGTTGAGATCGGACGGCTGATAGGGGACATGGTGTTCGAGTTCGAGAAGGGCGTGGAAATAGTGATCCCCAAGGAGAGGGTTCTCGCTTCCGTGGAGGGTGGGGTCCACTGCGTCGGGATTGGCAACTCTGATAAATTGGGTGCGGCCAGTAACATCATTGGGAATTTCCATCAGCAGAATCTGTGGGTGGAGTTTGATCTCGTCAATCGCAGAGTGGGTTTCGGTGCGGCTGATTGTAGCAGATTGGCTCAATAG 1341 0.5265 MPPLFFFFFFLFLSLLFSPLLSLQLNHTSFSLSFPLTSLPLSTNTASKMLRDSLIAYSNRTTNHTRLTSPSSPYNYRLTFKYSMVLIVNLPIGTPPQVQPMLLDTGSQLSWIQCHRKPPKVPPPTASFDPSLSSTFSILPCTHPVCKPRIPDFTLPTSCDQNRLCHYSYFYADGTYAEGNLVREKFTFSRSLFTPPLILGCATESTDPRGILGMNRGRLSFASQSKITKFSYCVPTRETRPGSTSSGSFYLGHNPNSLRFKFVQMLTFTQSQRMPNLDPLAYTVALLGIRIGGRKLNISPAVFRADAGGSGQTMIDSGSDFTYLVNEAYDKVRAQVVRAVGPRMKKDYVYSGVADMCFDGNAVEIGRLIGDMVFEFEKGVEIVIPKERVLASVEGGVHCVGIGNSDKLGAASNIIGNFHQQNLWVEFDLVNRRVGFGAADCSRLAQ* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2370 446 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 5 445 - -
Pvu1g2370 446 Pfam Xylanase inhibitor N-terminal 87 244 IPR032861 -
Pvu1g2370 446 PANTHER ASPARTYL PROTEASE-RELATED 5 445 IPR001461 GO:0004190|GO:0006508
Pvu1g2370 446 CDD pepsin_A_like_plant 87 441 IPR034161 -
Pvu1g2370 446 Gene3D Acid Proteases 254 445 IPR021109 -
Pvu1g2370 446 Pfam Xylanase inhibitor C-terminal 281 437 IPR032799 -
Pvu1g2370 446 Gene3D Acid Proteases 61 252 IPR021109 -
Pvu1g2370 446 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 101 112 IPR001969 GO:0004190|GO:0006508
Pvu1g2370 446 SUPERFAMILY Acid proteases 86 444 IPR021109 -
Pvu1g2370 446 ProSiteProfiles Peptidase family A1 domain profile. 86 437 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2370 Pvu-Chr1 49016359 49018204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2370 88 446 Miscellaneous Gene Families AT1G44130 22.864 1.45e-20 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2370 - - gmx:100803089 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2370 1 49016359 49018204 Pvu1g2370 1 49016359 49018204 ECH
Pvu1g2370 1 49016359 49018204 Pvu8g2459 8 55167447 55169178 PCT