Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1999 ATGGCCACCGACATCGACCAAGGAGGCTGCGCCACCACCATCTCCGCTGTGCATCCCGATATAATTCAAACCCATATCCTCACGTGCCTGGACGGCCCCGCGCTAGCTTCAATTGCCAGCACGTGCTCCCAACTCCATACCCTCTCAGAACACGAGCAGCTCTGGGAGAACATCTGCCATGCCACGTGGCCATCCACCAAGACGCCACGGGTGCGCCACATAATCTCAACGTTCCCACGCGCCTCGCGTTCTTTTTTCTCCGACTGCTTCCCTTCATTTGCTGCTGCAGGCACTTGTCGCCACACGAGCATCGAGTGTACGCCGGACCTTGTCACGGCGGTGGACCTATTCCACGGGAGGCAGCTGGTGCTTTCGCGGGTGGTGGAGACGGAGACAGAGTCCGGTTGGTTCCGGTGCTCGCCGTTTAGAGTTGACGTGCTGGATCCGAAGGAGGCGGTGGCGACGGCGATGGAGTATCCGCGGAGCGAGGAAGCGTGCGAGAGGCTCCGGGAGGAACTGAGGCTGAGCTGGATAGTGGTGGATCCTGAGGGAAAGCGCGCGGTGAACGTGTCAAGCGGGAGGGCGGTGTCGGTTGAGCGGCACTGGCTGAGTGGGGAGGTGCGCATCCGGTTCGCGACGGTGGTGGGCGGCGGGGAGAGGGGTTCGGCATGGGAGGCGGTGCTGTGCAGCGTGACTGTGACTTGCGGGAGTGAGATGCAGGTGAGGGAAGCGTGTGTGCAGATGGAGGACATGGACGGAATGATCCTGAATGGGAGGGAGAGTTTGGGGATTTTGCAAAGGGCTTTGGAGGGTAAAAGGGGAACATTATTTGTGGACGGAGAAAAAGATAGATTCTTGGAATTCATAAATAAGAAGACGGAGAGAAAGGAAAGGAAGATGAGAGATGAAAGAAGGTTGGACATGGTGTGCGTGACTCTAGCTTTTTTGTCCTTTGCGGCTATTTCTACACTCTTTTTCTTCTGA 984 0.5752 MATDIDQGGCATTISAVHPDIIQTHILTCLDGPALASIASTCSQLHTLSEHEQLWENICHATWPSTKTPRVRHIISTFPRASRSFFSDCFPSFAAAGTCRHTSIECTPDLVTAVDLFHGRQLVLSRVVETETESGWFRCSPFRVDVLDPKEAVATAMEYPRSEEACERLREELRLSWIVVDPEGKRAVNVSSGRAVSVERHWLSGEVRIRFATVVGGGERGSAWEAVLCSVTVTCGSEMQVREACVQMEDMDGMILNGRESLGILQRALEGKRGTLFVDGEKDRFLEFINKKTERKERKMRDERRLDMVCVTLAFLSFAAISTLFFF* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1999 327 PANTHER OS12G0156500 PROTEIN 3 321 - -
Pvu1g1999 327 SUPERFAMILY F-box domain 19 82 IPR036047 GO:0005515
Pvu1g1999 327 Gene3D - 9 88 - -
Pvu1g1999 327 PANTHER F-BOX PROTEIN-RELATED 3 321 IPR045283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1999 Pvu-Chr1 45869573 45870556 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1999 - - vra:106757292 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1999 1 45869573 45870556 Pvu1g1999 1 45869573 45870556 ECH
Pvu7g2193 7 45225022 45226738 Pvu1g1999 1 45869573 45870556 PCT