Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0977 ATGGCAGCCTCATCCTCCTTCTCCTCCTTCCTCTCCTTTCTCCTCCCTCCCAAGCAGCCACAACTGCACCCTCCTCCCGTCACGCGCTTTTCGTTTCAAAGCCACAAGCTCCGTGCTCAACACCAAGATCACCACTCACCGGAGCTGCCCTCCCACGTGATAATGAACCCTTCTCACGCGCAGGCAAACACGCTCTTCTTCCGCTCTGCGTACAACGTGCAGGTGGTGGTTGACGAGAACGAGCCCGAGGAGAGGCTGCTCAACCGCTTCCGGAGAGAGGTCATGAAAGCCGGAGTCATACAAGAATGCAAGAGGAGACGCTTCTTTGAGAACAAGCAGGAGGAGAAGAAACGCAAGAACCGCGAAGCCGCTAAGCGTAAAAGCAGAATGAGGCGCCCTCAATCAAGATATCAACCACAAAACAAGCCGGATGTTGCAACAGCCAAGAAGGTGGAGGATGATGATAACTGGGATCTTCCAGAAGTAGATGCTCCATATATTTCAACCACATGA 513 0.5322 MAASSSFSSFLSFLLPPKQPQLHPPPVTRFSFQSHKLRAQHQDHHSPELPSHVIMNPSHAQANTLFFRSAYNVQVVVDENEPEERLLNRFRREVMKAGVIQECKRRRFFENKQEEKKRKNREAAKRKSRMRRPQSRYQPQNKPDVATAKKVEDDDNWDLPEVDAPYISTT* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0977 170 Pfam Ribosomal protein S21 74 127 IPR001911 GO:0003735|GO:0005840|GO:0006412
Pvu1g0977 170 PRINTS Ribosomal protein S21 family signature 76 84 IPR001911 GO:0003735|GO:0005840|GO:0006412
Pvu1g0977 170 PRINTS Ribosomal protein S21 family signature 84 93 IPR001911 GO:0003735|GO:0005840|GO:0006412
Pvu1g0977 170 PRINTS Ribosomal protein S21 family signature 96 106 IPR001911 GO:0003735|GO:0005840|GO:0006412
Pvu1g0977 170 PRINTS Ribosomal protein S21 family signature 108 118 IPR001911 GO:0003735|GO:0005840|GO:0006412
Pvu1g0977 170 MobiDBLite consensus disorder prediction 112 170 - -
Pvu1g0977 170 PANTHER PROTEIN S21 FAMILY PROTEIN, PUTATIVE-RELATED 36 166 - -
Pvu1g0977 170 Hamap 30S ribosomal protein S21 [rpsU]. 72 128 IPR001911 GO:0003735|GO:0005840|GO:0006412
Pvu1g0977 170 Gene3D Ribosomal protein S8 87 125 IPR038380 -
Pvu1g0977 170 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21 36 166 IPR001911 GO:0003735|GO:0005840|GO:0006412
Pvu1g0977 170 TIGRFAM S21p: ribosomal protein bS21 73 130 IPR001911 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0977 Pvu-Chr1 20537277 20539547 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0977 - - gmx:100780245 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0977 1 20537277 20539547 Pvu4g0589 4 7055374 7057738 PCT