Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0673 ATGGTTGGGAAGGAGGGAACTGGGGTGCTGAACATGAGTTTTGGAAAGCTTATGATGGTTGGTGGTGGTGAAGATAGTGGGAAAGGAGTGAACTTGAAAGCTGGGGTCATCACCGAATGGAAGGATATTCCAGTGGAGCTTTTGATGCAAATTCTGTCACTTGTGGATGATCAAACGGTGATCATAGCGTCTGAAGTTTGTCGTGGGTGGAGAGAGGCAATTTGCTTTGGCCTTACCCGGTTATCACTCTCATGGTGTAGCATGAACATGAATAACTTGGTCCTATCTCTTGCTCCTAAATTTACAAAATTGCAAACTTTAATCCTTCGTCAAGACAAACCTCAACTAGAGGACAATGCTGTTGAGACTATTGCAAATTTCTGTCATGAGCTCCAAGTCCTGGACCTCAGCAAAAGTTTCAAGCTCACAGATCGTTCATTGTATGCCATAGCCCTAGGTTGTTGGCATCTTACAAAACTGAACATTAGTGGTTGTTCAGCCTTTAGTGACAGAGCTCTGGCTTCCCTAGCCAGTTTATGCAGAAAGCTTAAATTTTTGAATCTATGTGGATGTGTTAAAGCCGCATCTGACACCGCATTACAGGCAATTGGACGTTACTGTAATCAATTACAGCTTTTGAACCTTGGATGGTGTGAAAATATCAGTGATGTTGGAGTAATGAGTTTAGCATATGGCTGCCCTGATCTTCGAACACTTGACTTGTGTGGTTGTCTCCTTATAACAGATGACAGTGTAATTGCCTTGGCAAACAGATGTCCTCATCTTAGGTCCCTTGGACTGTACTACTGCCAAAATATAACAGACAGAGCAATGTATTCTTTGGCACAAAGCAAAGTGAAGAATAGAATGTGGGGGTCTGTGAAAGGTGGAAATGAAGAGGATGGATTAAGGACTCTGAACATTAGCCAATGCACAGCACTCACCCCTTCTGCTGTGCAGGCTGTATGTGACTCATCCCCTGCACTCCACACCTGTTCTGGAAGACACTCACTTATCATGAGTGGTTGTCTGAGTCTGACATCTGTGCACTGTGCATGTGCTGTCCAAGCACACAGTGGTATCAGCACCATTCCTAATACAGCTCATTGA 1110 0.4396 MVGKEGTGVLNMSFGKLMMVGGGEDSGKGVNLKAGVITEWKDIPVELLMQILSLVDDQTVIIASEVCRGWREAICFGLTRLSLSWCSMNMNNLVLSLAPKFTKLQTLILRQDKPQLEDNAVETIANFCHELQVLDLSKSFKLTDRSLYAIALGCWHLTKLNISGCSAFSDRALASLASLCRKLKFLNLCGCVKAASDTALQAIGRYCNQLQLLNLGWCENISDVGVMSLAYGCPDLRTLDLCGCLLITDDSVIALANRCPHLRSLGLYYCQNITDRAMYSLAQSKVKNRMWGSVKGGNEEDGLRTLNISQCTALTPSAVQAVCDSSPALHTCSGRHSLIMSGCLSLTSVHCACAVQAHSGISTIPNTAH* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0673 369 Gene3D - 37 76 - -
Pvu1g0673 369 PANTHER UNCHARACTERIZED 2 351 - -
Pvu1g0673 369 Gene3D Ribonuclease Inhibitor 77 290 IPR032675 -
Pvu1g0673 369 Pfam F-box-like 41 74 IPR001810 GO:0005515
Pvu1g0673 369 SUPERFAMILY F-box domain 39 75 IPR036047 GO:0005515
Pvu1g0673 369 PANTHER F-BOX SKP2A-LIKE PROTEIN 2 351 - -
Pvu1g0673 369 SMART LRR_CC_2 300 325 IPR006553 -
Pvu1g0673 369 SMART LRR_CC_2 101 127 IPR006553 -
Pvu1g0673 369 SMART LRR_CC_2 154 179 IPR006553 -
Pvu1g0673 369 SMART LRR_CC_2 128 153 IPR006553 -
Pvu1g0673 369 SMART LRR_CC_2 180 206 IPR006553 -
Pvu1g0673 369 SMART LRR_CC_2 233 258 IPR006553 -
Pvu1g0673 369 SMART LRR_CC_2 259 284 IPR006553 -
Pvu1g0673 369 SMART LRR_CC_2 75 100 IPR006553 -
Pvu1g0673 369 SMART LRR_CC_2 207 232 IPR006553 -
Pvu1g0673 369 SUPERFAMILY RNI-like 67 283 - -
Pvu1g0673 369 Pfam Leucine Rich repeat 259 282 IPR001611 GO:0005515
Pvu1g0673 369 Pfam Leucine Rich repeat 233 256 IPR001611 GO:0005515
Pvu1g0673 369 Pfam Leucine Rich repeat 207 230 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0673 Pvu-Chr1 8258937 8262787 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0673 K03875 - gmx:100793275 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0673 1 8258937 8262787 Pvu1g0673 1 8258937 8262787 ECH
Pvu1g0673 1 8258937 8262787 Pvu9g1377 9 19595692 19599411 PCT