Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0651 ATGGTGAATTCCATGGTCGAGCGCGCCACGAGCGACATGCTCATAGGGCCCGATTGGGCCATGAACATCGAGATCTGTGACATGCTCAATCATGACCCTGGGCAAGCAAAGGATGTCGTGAAAGGGATAAAAAAGAAGATTGGAAGTAAAAATTCAAAAGTTCAACTTCTTGCATTAACTTTGTTGGAGACAATCATAAAGAATTGTGGAGATATTGTTCATATGCATGTTGCCGAGAGAGATGTGCTTCATGATATGGTCAAAATGGTGAAGAAAAAGCCTGATTTTCATGTCAAAGAGAAGATATTGATTCTTGTAGATACTTGGCAAGAAGCATTTGGAGGCCCGAGGGCAAGATATCCACAATATTATGCTGCATACCAGGAACTGTTGCGTGCTGGGGCAGTATTCCCTCAGAGATCGGAACAATCTGCACCTGTATTGACACCCCCGCAAACACAGCCATTGGCATCATACCCTCAAAATATACGTGACTCAGATGCTCGTCAGGACACAGCTGAATCCTCTGCTGAGTCTGAGTTTCCAACTCTAAGTTTGACAGAAATTCAGAATGCTCGTGGCATCATGGATGTTCTTGCAGAAATGCTCAATGCCTTAGACCCTAGTAACAAAGAAGGGATTAGACAGGAGGTTATTGTTGACCTGGTGGAGCAGTGTCGAACTTACAAGCAGAGAGTGGTACACCTTGTCAACTCAACTTCCGATGAATCACTGCTATGCCAAGGACTGGCCCTGAATGATGATCTGCAGCGTGTACTGGCCAAGCACGAATCTATTTCTTCAGGAACTTCAACCCAAAACCAAAATCACACAGAAAATTCAAAATCTGCCCTTCCTGGAGCTCTTGTAGATATAGATGCTCCTTTGGTTGATACTGGGGATACTAGCAAACAAACTATAGAGAGATCCTCTTCTAATGTTCAAGCTGAATCCCAAACAATGAATCAGTTGCTGCTTCCTGCGCCTCCAATTTCTAATGGTTCAACAATTCCTGCTAAGGTTGATCCCAAATTGGACCTACTCAGTGGCGATGACTATAACTCTCCAAAAGCAGATGCTTCAAATGCTCTTGTTCCTCTTGGAGAACAGCCACCTGCTAATCCTGTTTCTCAGCAGAAGGCCCTTGTTCCTTTTGATATGTTTTCTAATGGAAATAATGCACCTACATCTGTGAATAGCCAGCTACCCCAGCCAGCTAATGTTGCTGGCCAAACCACTCCATATGCTCCCCAATTTCAACAACAGCAAACAGTCATATCTCAAGGTGGATTTTACCCCAATGGAAATGTCCCAAATGCAGGTTCGGCTCAGTATGAGCAACAATCTCTGTATACAGAGAGTACAGGTCCTGCCTGGAATGGTCAGGTTGCACAACAGCAGCAACAGCCACCTTCGCCTGTTTACGGTTCACAAAGCAGTGGATCATTGCCACCCCCTCCTTGGGAAGCTCAACTACCAGATAATGGAAGTTCAGTAGCTGGCGCTCAGTATCCATACGTGCAGAATGCAGTACATCCTCCGGGGTCTCAAACAATGGGCAATGACCAGGGTGTCGGCATGTATATGCAGCCAAATGCTAACAGCCATATGTCAGGAATGAATAACCATGTTGGAAGCAACCAAATGGGCTTGCAACCTCAGCATATGCAAGGTGTTGCAGGACCCTACATGGGTATGGCTTCACATCAAATGCAGGGTGGTCCTGTGATGTATCCTCAACAAATGTACGGAAACCAATTTATGGGATACGGGTATGATCAGCAACAAAGAGTTCCATACATTGAACGGCAAATGTATGGTATGTCTGTGAGAGATGACAGTGCTTTGAGAAACTCTTACCCAGTTTCTACCACATCTTATGCTGCATCTGGGAAACCTTCCAAGCCTGAGGATAAGTTATTTGGAGACCTTGTTGACATGGCAAAAGTGAAGCCCAACCCCACCCCAGGACGAGCTGGTAGCATGTAA 1989 0.453 MVNSMVERATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKKIGSKNSKVQLLALTLLETIIKNCGDIVHMHVAERDVLHDMVKMVKKKPDFHVKEKILILVDTWQEAFGGPRARYPQYYAAYQELLRAGAVFPQRSEQSAPVLTPPQTQPLASYPQNIRDSDARQDTAESSAESEFPTLSLTEIQNARGIMDVLAEMLNALDPSNKEGIRQEVIVDLVEQCRTYKQRVVHLVNSTSDESLLCQGLALNDDLQRVLAKHESISSGTSTQNQNHTENSKSALPGALVDIDAPLVDTGDTSKQTIERSSSNVQAESQTMNQLLLPAPPISNGSTIPAKVDPKLDLLSGDDYNSPKADASNALVPLGEQPPANPVSQQKALVPFDMFSNGNNAPTSVNSQLPQPANVAGQTTPYAPQFQQQQTVISQGGFYPNGNVPNAGSAQYEQQSLYTESTGPAWNGQVAQQQQQPPSPVYGSQSSGSLPPPPWEAQLPDNGSSVAGAQYPYVQNAVHPPGSQTMGNDQGVGMYMQPNANSHMSGMNNHVGSNQMGLQPQHMQGVAGPYMGMASHQMQGGPVMYPQQMYGNQFMGYGYDQQQRVPYIERQMYGMSVRDDSALRNSYPVSTTSYAASGKPSKPEDKLFGDLVDMAKVKPNPTPGRAGSM* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0651 662 Pfam VHS domain 3 129 IPR002014 GO:0035091|GO:0043130
Pvu1g0651 662 PANTHER TOM1-LIKE PROTEIN 1 656 IPR044836 GO:0035091|GO:0043130|GO:0043328
Pvu1g0651 662 Gene3D - 183 277 IPR038425 -
Pvu1g0651 662 SUPERFAMILY GAT-like domain 141 269 - -
Pvu1g0651 662 CDD VHS 2 132 - -
Pvu1g0651 662 CDD GAT_GGA_like_plant 188 266 - -
Pvu1g0651 662 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Pvu1g0651 662 MobiDBLite consensus disorder prediction 392 412 - -
Pvu1g0651 662 PANTHER TARGET OF MYB PROTEIN 1 1 656 - -
Pvu1g0651 662 MobiDBLite consensus disorder prediction 461 500 - -
Pvu1g0651 662 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Pvu1g0651 662 MobiDBLite consensus disorder prediction 461 485 - -
Pvu1g0651 662 Pfam GAT domain 194 268 IPR004152 GO:0035091|GO:0043130
Pvu1g0651 662 Gene3D - 1 135 IPR008942 -
Pvu1g0651 662 MobiDBLite consensus disorder prediction 142 161 - -
Pvu1g0651 662 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Pvu1g0651 662 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0651 Pvu-Chr1 7867819 7881248 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0651 - - gmx:100809022 1139.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0651 1 7867819 7881248 Pvu1g0651 1 7867819 7881248 ECH
Pvu9g1097 9 16105797 16114492 Pvu1g0651 1 7867819 7881248 PCT