Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0519 ATGTCCCACCACCAAACCACCTTCATGCCCACCCCTTCCCGCTCCTCCTCCCTCCCCCTCATCCACGCCATCTTCTCCAGAAAATCCCTCTTCTACAACCGACTTCCCTCCCTACCCCTCCGACTCTCCGTCCTCAAACTCGACGGTTCCTCCTTCCATATTCAGGTTTCCAAGACGGCCACTGTTGCCCAACTCAAAGACGCAGTCGAGGCTGTCTTCTCCCACGCGCCTCTCAAGGGTCCCGCCCAAATTTCATGGGCGCATGTTTGGGGGCAGTTTTGCTTATGCTATGATGGACAGAAGCTGGTTACCGAGAATGATTATCTTCGAAATTATGGCATCAAGGATGGTGATCAGCTTCGTTTCATTCGCCATGTTTCAAACAATTGCTGTGTCCAAAGAAAGCGGTTGAAGAAAAGAATTGTCTATTTGAAACAGCACAGGAGGTCTTCTCCAGTGAATAGTCATCAACACAAAGGAAAGTGTGTTAATGATGAGATTGCTTCTGATGATGAAGCCACGGATAATGAGAAGCATGATATTGAAGAAGTAGAAGAAGAGCGCGTTGTAAAGAACAAATTTGCTGGCTTTGTGGGAGAGTTGTTCTCATACACTCCACTAGCAGTTGTGAGAAGAACTACTACTAAAAACAGAATTTGGCCATCAACTATTCCCAGATGTTTGCTGGGTAGTTTTAGAAAGATTAGAAGTATTGTATGCTTTGGCAGGAGGAGGCCCTATTCTCGGAGACTTACATGGAAACATATGGGATAA 774 0.4638 MSHHQTTFMPTPSRSSSLPLIHAIFSRKSLFYNRLPSLPLRLSVLKLDGSSFHIQVSKTATVAQLKDAVEAVFSHAPLKGPAQISWAHVWGQFCLCYDGQKLVTENDYLRNYGIKDGDQLRFIRHVSNNCCVQRKRLKKRIVYLKQHRRSSPVNSHQHKGKCVNDEIASDDEATDNEKHDIEEVEEERVVKNKFAGFVGELFSYTPLAVVRRTTTKNRIWPSTIPRCLLGSFRKIRSIVCFGRRRPYSRRLTWKHMG* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0519 257 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 11 253 IPR039690 GO:0000398|GO:0005689
Pvu1g0519 257 CDD Ubl_SNRNP25 40 125 IPR040610 -
Pvu1g0519 257 Gene3D - 37 133 - -
Pvu1g0519 257 SUPERFAMILY Ubiquitin-like 39 131 IPR029071 -
Pvu1g0519 257 Pfam Ubiquitin-like domain 40 126 IPR040610 -
Pvu1g0519 257 PANTHER - 11 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0519 Pvu-Chr1 5657813 5661002 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0519 - K13153 pvu:PHAVU_001G050800g 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0519 1 5657813 5661002 Pvu1g0519 1 5657813 5661002 ECH
Pvu9g0948 9 14293164 14296424 Pvu1g0519 1 5657813 5661002 ECH
Pvu1g0519 1 5657813 5661002 Pvu9g0948 9 14293164 14296424 PCT